Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02489 ATGGGTTCTTTGAACTCAACAAAACATCTTTCTCTTTGCTCCTATGAAAGAAGAAATTATTTAGGAAATAACAAAATGGGTTGTATGGACACAACAAAGAAGACTCTACCTCATGTTGTGTGTATCCCATATCCAGCACAAGGTCACATAAATCCAATGCTTAAATTAGCAAAACTTCTTCATTATAAAGGTGGTTTTCATGTTACCTTTGTTAACACAAAATTTAACCATAAACGTCTTCTTAAAGCTAGAGGTCCTAATTCTCTCGATGGCCTCCCATCTTTTCGTTTTGAAACTATTCCTGATGGTCTTCCTGAGTCCGATGTGGATGCGACACAGGATATTCCTTCCTTGTGTGAGTCTACTAAAAAAACTTGTTTACCTCACTTTAAAAATCTTCTTTCAAAACTTAATAATGCTATAGACACCCCTCCTGTTACTTGCATAGTTTCTGATGGTGTTATGAGCTTTACTTTGGATGCTGCTCAAGAACTTAATATCCCAGAAGTACTTTTTTGGACAACAAGTGCTTGTGGATTTATGGGTTACATGCAATATCGTCATCTCATAGAAAAGGGCTTAACACCACTCAAAGACTCAAGTTTTATGACAAATGGATATTTGGAGACTATCATAGATTGGGTGCCAGGCATAAAAGAAATACGATTAAAGGATATTCCAAGCTTTATCAGAACTACAGACCCAAATGATcttatgattaattttttaatgggGGAGTGCCAAAGAGCACAAAAAGCATCAGCAATAATTTTTAACACATTTGATAATCTAGAGCACAACGTTTTAGAAGCATTCTCTTCCATTAATTTGCCTCCAGTTTATTCAATTGGTCCTTTGAATTTACTCTTAAAAGATGTGACGCATAAGGAATTGAACTTAATTGGTTCTAACCTTTGGAAAGAAGAGACAGAGTGTTTGGAAtggttaaataaaaaagaaccgAACACTGTTGTTTATGTCAATTTTGGAAGTATCACAGTTATGACAAATGAACAAATGATTGAGTTTGCTTGGGGGCTAGCtaatagtaaaaaaacatttttgtggGTAATAAGACCAGATCTTGTGGCTGGTGAAAATGCTGTTTTACCCCAAGAGTTTTTGGATGAGACAAAAAACAGAGGATTATTGTCAAGCTGGTGTCCACAAGAGGAAGTGTTGACTCATTCAGCAATTGGTGGATTTTTGACGCATAATGGTTGGAATTCAACGTTGGAAAGTGTGTGTGGTGGTATTCCAATGATATGTTGGCCTTTTTTTGCGGAACAACAGACAAATTGTAGATTTTGTTGTAATGAATGGATGATTGGTTTGGAAATTGAAGATGCTAAGAGAGATAAGATAGAGGATCTTGTGAGGGAATTGATGGATGGAGAAAAGGGTAAAGAGATGAAAGAGAAAGCTTTACAATGGAAGAAATTGGCACTAAATGCTGCTTCTAGTCCACATGGATCATCTTTTGTGAATCTTGAGAACCTCATTTGTGATGTTCTCAAGTGA 1521 0.3498 MGSLNSTKHLSLCSYERRNYLGNNKMGCMDTTKKTLPHVVCIPYPAQGHINPMLKLAKLLHYKGGFHVTFVNTKFNHKRLLKARGPNSLDGLPSFRFETIPDGLPESDVDATQDIPSLCESTKKTCLPHFKNLLSKLNNAIDTPPVTCIVSDGVMSFTLDAAQELNIPEVLFWTTSACGFMGYMQYRHLIEKGLTPLKDSSFMTNGYLETIIDWVPGIKEIRLKDIPSFIRTTDPNDLMINFLMGECQRAQKASAIIFNTFDNLEHNVLEAFSSINLPPVYSIGPLNLLLKDVTHKELNLIGSNLWKEETECLEWLNKKEPNTVVYVNFGSITVMTNEQMIEFAWGLANSKKTFLWVIRPDLVAGENAVLPQEFLDETKNRGLLSSWCPQEEVLTHSAIGGFLTHNGWNSTLESVCGGIPMICWPFFAEQQTNCRFCCNEWMIGLEIEDAKRDKIEDLVRELMDGEKGKEMKEKALQWKKLALNAASSPHGSSFVNLENLICDVLK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02489 506 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 32 84 - -
Tsu05g02489 506 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 86 502 - -
Tsu05g02489 506 Gene3D Glycogen Phosphorylase B; 38 487 - -
Tsu05g02489 506 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 37 501 - -
Tsu05g02489 506 Gene3D Glycogen Phosphorylase B; 307 484 - -
Tsu05g02489 506 PANTHER GLYCOSYLTRANSFERASE 32 84 - -
Tsu05g02489 506 PANTHER GLYCOSYLTRANSFERASE 86 502 - -
Tsu05g02489 506 CDD GT1_Gtf-like 37 495 IPR002213 GO:0008194
Tsu05g02489 506 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 95 470 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02489 Tsu-Chr5 33814947 33818969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02489 26 505 Glycosyltransferase AT1G22380 63.561 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02489 - - gmx:100784251 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02489 05 33814947 33818969 Tsu05g02489 05 33814947 33818969 ECH