Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02416 ATGGCACACCGCCTCCTCATTCATCTTCCTTATTCCCACGCCAGACACCCATTCATCACCACCTCCTTCTTCTCTACTCGCTGCCTCCGCCCTTCCGCTCCATTTCCGCCGCAATCTCCGCCGTCCCCTAAGAAAATCCCATTCACGGTATCTGTTCACGGGAGGACATGGCAGGACCCATATCACTGGATGTCTAACACGGACGATCCCCATCTGTTGGAACATCTTAACCGTGAAAACAGCTATACCAATGCATTCATGGCTGATACTCTCGAACTCTGCTCTCAATTGTCTACTGAGATGAAAACTCGTTTACCTTCTTCTATTTCCACTCCTCCTGAACTTTGGGGACCCTGGTTGTATTATCAGTACATTCCAGAGGGAAAGGAATATCCTGTGCTTTGTAGGAAGCTGGAAACAGAGAGAAGTGGTTGGATGAAGACAATTTTGTTTCGGCATGGAATGACAAGATCAAAAAATGAGGAGGTTTTGCTTGACTGGAATGAACTCGCAGAGAGATATGGGTATGTCCACGTGGGAACATGTAGAGTTTCACCAGATCATAACTACATTGCATACACAGTTGATACCTCTGGTGGTGAACGATTTGTACTTCAGGTTAAAGACCTTAGAAGTGGACTAAATGACCCAAAAGTAGAAGTTGATGGTGTTGTTAGCTTGGCTTGGTCTCAAGATGCAAGTTCCCTTTTTTATACTCAATCAGATGAAAATCAGCGACCTTACAGGCAAAATATTGTAACCAGATTTTCTGTTTTGGTTCTCTGCAGAAAACTAGGATATGATCTTGTGAATGATCTCCCAGTATTTACTGAAAGCGATTCCAGTTTTTGTGTGGACATAACAAGCACAAAGGATGGCAAGTTCATTACTGTTTATGTTATAGATTCCGCCAATCCAATGGATGGTTTACAAAGACTATGCGAACGTACCTCTGGTGTACAGTATTTTGTAGAACATCACTCTGGTCTATTTTATATCCTTACTAATGCTCATTTGCCTGATGGTAAATGGTCTGGTGATGAGTATTACCTTGTTAGGTGCCGAGTTGAAGATATACAGTCACCTAAATTACAGAATATCATCCTTCCTGATAAAGACACAATCCTATGTGATATGGACATCTTTAATGGACATCTGGTTCTTTTCCTCAATAAGAAAGGTCTTCCTTTGTTATGTTCCTTGAACTTACCTTTCCAAATTGATTTGAAGGATCAAGTATATATTCAAGACCTGAAACCTTGGTACTTTCCTATGCCATCAAATACATGCAGTGCCATTCCTGGTTCAAATCACGACTTCCTGACTGCAGTTTACCGTATGGTGCTTTCATCACCTGTGATGCCAGATGTTATTGTTGACTATGACATGTCGAGACAGACATATTCAATTGTGCATCAAGAGGAAGTGAATTGTGATTCTGTTGGTCAGTCACGAATCCCACCTTTTGAgcttattaataataaaattcaagAGCCATGCAGCGATAAAAAGGAGTGTGCCTTGGATTCTGATTCACAGAGATGGAAGGATTTTTCAGAAGTATACTGTTGTCAGAGAGAGGAAGTTGTTTCCCATGATGGTGTCAAAGTTCCACTAACCATTGTGTACTCTAGGGAATTCTGGCAAAAGGGTCAACGCCCTGGACTTTTAATAGGCTATGGAGCATATGGAGAAGATCTTGATAAGAGCTGGTGTTCGGATCGCCTGAGTTTATTGGACCGTGGTTGGGTTGTGGCATTTGCTGATGTAAGAGGTGGTGGTGGCGGAGGTCGTTCATGGCATAAATCTGGGAGTGGATTAAACAAACACAATTCAATATCTGACTTTGTATCTTGTGGCAACTACCTGGTTAGTGAGGGTTATGTCCACAGAGATCAGCTTAGTGCTATTGGATGGAGTGCTGGCGGCCTTCTTGTTGGTGCAGCTATGAATATGTATCCACAACTATTTCGTGCCGCCATATTAAAGGTGCCATTTCTTGATGTATGCAACACATTGTTGGATCCAAGTCTGCCCCTTACAATCCTGGATTATGAAGAATTTGGAAATCCTCAAATTCAATCGAACTTCGattcaatttttagtttttctccttACGACAACATTCCTCAAGGCTGTTGCTTTCCTTCAGTTATGGTTACAGCAGCAGTTAATGATTCAAGGGTTGGAGTTTGGGAAGGTGCTAAGTGGGTAGCTAAAGTACGAGATAGTACCTGCACTCATTGTTCTCGCAGTGTCATCATGAAAACAAATTTTCATGGAAAAACGGATGAGTTATTTCAGAGACGCAGGGACCGTAACAATTTGGTATCACGAGCCAACATGGTTGACACGGATTTAGCAACAATAATGAATGACTTCTGGAATAGAGTGGGCACGCTTCAACCAATGTTGCCATATACGGTTTGGACCGCTATGAGCAATAATCCATCGGGAGAACTCACCAACTTCAAGCAAACTGGATCTGTGGAAGATTATCAACGCCAGTTTCAGAACTCATGA 2523 0.4182 MAHRLLIHLPYSHARHPFITTSFFSTRCLRPSAPFPPQSPPSPKKIPFTVSVHGRTWQDPYHWMSNTDDPHLLEHLNRENSYTNAFMADTLELCSQLSTEMKTRLPSSISTPPELWGPWLYYQYIPEGKEYPVLCRKLETERSGWMKTILFRHGMTRSKNEEVLLDWNELAERYGYVHVGTCRVSPDHNYIAYTVDTSGGERFVLQVKDLRSGLNDPKVEVDGVVSLAWSQDASSLFYTQSDENQRPYRQNIVTRFSVLVLCRKLGYDLVNDLPVFTESDSSFCVDITSTKDGKFITVYVIDSANPMDGLQRLCERTSGVQYFVEHHSGLFYILTNAHLPDGKWSGDEYYLVRCRVEDIQSPKLQNIILPDKDTILCDMDIFNGHLVLFLNKKGLPLLCSLNLPFQIDLKDQVYIQDLKPWYFPMPSNTCSAIPGSNHDFLTAVYRMVLSSPVMPDVIVDYDMSRQTYSIVHQEEVNCDSVGQSRIPPFELINNKIQEPCSDKKECALDSDSQRWKDFSEVYCCQREEVVSHDGVKVPLTIVYSREFWQKGQRPGLLIGYGAYGEDLDKSWCSDRLSLLDRGWVVAFADVRGGGGGGRSWHKSGSGLNKHNSISDFVSCGNYLVSEGYVHRDQLSAIGWSAGGLLVGAAMNMYPQLFRAAILKVPFLDVCNTLLDPSLPLTILDYEEFGNPQIQSNFDSIFSFSPYDNIPQGCCFPSVMVTAAVNDSRVGVWEGAKWVAKVRDSTCTHCSRSVIMKTNFHGKTDELFQRRRDRNNLVSRANMVDTDLATIMNDFWNRVGTLQPMLPYTVWTAMSNNPSGELTNFKQTGSVEDYQRQFQNS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02416 840 SUPERFAMILY Peptidase/esterase 'gauge' domain 35 477 - -
Tsu05g02416 840 Pfam Prolyl oligopeptidase family 574 765 IPR001375 GO:0006508|GO:0008236
Tsu05g02416 840 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 41 471 IPR023302 GO:0004252
Tsu05g02416 840 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 29 761 - -
Tsu05g02416 840 Gene3D alpha/beta hydrolase 492 776 IPR029058 -
Tsu05g02416 840 Gene3D - 110 475 - -
Tsu05g02416 840 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 29 761 - -
Tsu05g02416 840 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 580 604 IPR002470 GO:0004252|GO:0006508
Tsu05g02416 840 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 696 711 IPR002470 GO:0004252|GO:0006508
Tsu05g02416 840 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 638 658 IPR002470 GO:0004252|GO:0006508
Tsu05g02416 840 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 554 572 IPR002470 GO:0004252|GO:0006508
Tsu05g02416 840 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 608 627 IPR002470 GO:0004252|GO:0006508
Tsu05g02416 840 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 715 737 IPR002470 GO:0004252|GO:0006508
Tsu05g02416 840 SUPERFAMILY alpha/beta-Hydrolases 525 743 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02416 Tsu-Chr5 32290213 32297205 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02416 - - gmx:100779514 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02416 05 32290213 32297205 Tsu05g02416 05 32290213 32297205 ECH