Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02394 ATGTCTAAAGCAAATGTAAGAAGACATGATGCAATGGAGAAAAAAACAAGTGACCAAGAACATTCAAGGAAAATAAACCAAATATTTTTCCACAAACACCTCAAAAGAGTGTACCCTAATGAATTACAAAAAAGTTCTTCGTCTTCATCCATATCTTCATTGTCATCATTACTgtcacaaaattcaaatgacTCTTCTTTCACAGATTCTTTGATTGTAGCAGACGAAAACGTCTCGTTAGCACTGCATTTGACTTCAGAACCTCAGAGAAGAGAATGTGCACAAATTAATACTTCCCAGAAACAACAAAGTCCTCATGCAGCCAAGCTTGGTGAATTGAAAAGATGCAAGTGGATCACAAAAAACTGTGATAAAGCATACATAGAATTTCATGATGAGTGTTGGGGAGTTCCAGCCTATGATGACAAAAAACTGTTCGAGCTGCTTGCGATGTCAGGATTGCTGATAGATTACAATTGGACAAAAATTCTAAAAAGAAAGGAAGTTCTAAGACAAGTTTTTGCTGGATTTGATCCAAACATTGTTGCCAAAATGGAGGAGAAGGAAATCATGGAGATAGCATCAAACAAAGAACTTTTATTAGCTGAATCCAGAGTTAAGTGCATAGTTGACAATGCCAAATGCTTATTAAAGATTATGAAAGAATATGGATCATTCAGTAGCTATATATGGAGTTATGTAAATCACAAACCGGTTATTAATAGATACAAATACTCAAGAGATGTTCCATTAAGGACACCAAGAGCAGATGCCATAAGCAAGGACTTAAAGAAACGTGGATTTAGATTTTTGGGTCCAGTGATTGTTTACTCTTTTATGCAAGTTGCAGGATTGACTATTGATcatcttgttgattgttataGGCACAAAGAATGTGTAAGCCTAGCAGAAAGGCCTTggaaacatatttaa 933 0.3387 MSKANVRRHDAMEKKTSDQEHSRKINQIFFHKHLKRVYPNELQKSSSSSSISSLSSLLSQNSNDSSFTDSLIVADENVSLALHLTSEPQRRECAQINTSQKQQSPHAAKLGELKRCKWITKNCDKAYIEFHDECWGVPAYDDKKLFELLAMSGLLIDYNWTKILKRKEVLRQVFAGFDPNIVAKMEEKEIMEIASNKELLLAESRVKCIVDNAKCLLKIMKEYGSFSSYIWSYVNHKPVINRYKYSRDVPLRTPRADAISKDLKKRGFRFLGPVIVYSFMQVAGLTIDHLVDCYRHKECVSLAERPWKHI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02394 310 SUPERFAMILY DNA-glycosylase 114 300 IPR011257 GO:0003824|GO:0006281
Tsu05g02394 310 Pfam Methyladenine glycosylase 118 296 IPR005019 GO:0006284|GO:0008725
Tsu05g02394 310 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 310 - -
Tsu05g02394 310 MobiDBLite consensus disorder prediction 1 23 - -
Tsu05g02394 310 PANTHER OS04G0501200 PROTEIN 1 310 - -
Tsu05g02394 310 Gene3D Hypothetical protein; domain 2 113 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02394 Tsu-Chr5 31991682 31994455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02394 K01246 - gmx:100817116 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02394 05 31991682 31994455 Tsu05g02394 05 31991682 31994455 ECH