Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02389 ATGGCACCTGTTCTTAGCAGAACCATGGCCGCCACTGCCTCTCTCGCTTCCCTCCCTTCTTCCTCCTCCTTTTCACTCTCAAGACCTTCTTCCGCTCTCAGAAGAACTGCTTTTCTCCCGCCACAACCCCCTCGTAGAAAGTGCTTATCTTCAACCACCGCTTTGAAGTGTAAACATCAAGCCAGAAGAGGTAGACTCTCCGTTCGATGTGAGGCTGCTGTTGCAGAGCCAGAAGAGGCTACTGGCGAGAAGTTTGAGTACCAAGCTGAGGTGAGCCGTTTGATGGATTTGATTGTTCACAGTCTTTATAGTCACAAGGAAGTTTTTCTTAGAGAACTTGTGAGTAATGCTAGTGATGCTTTGGACAAGTTGAGGTTTTTGAGTGTGACCGAGCCTTCTTTGCTTGGAGAGGCTGGAGAACTAGAGATTCGAATCAAGCCTGATCCGGACAATGGAACTATTACTATAACAGATACTGGTATTGGAATGACCAAAGAAGAGCTCGTTGATTGTCTTGGAACTATTGCTCAGAGTGGTACCTCAAAGTTTTTGAAGGCACTTAAGGAAAACAAGGATCTTGGAGCAGATAATGGTTTGATTGGTCAATTTGGTGTTGGATTCTACTCTGCATTTCTTGTTGCTGACAGGGTTATTGTTTCTACAAAGAGCCCTAGATCAGATAAGCAATATGTATGGGAAGCTGTAGCTGACAGCAGTTCTTATGTGATAAGGGAAGAAACTGATCCTGAAAAGGTTTTGCGCCGTGGTACACAGATTACACTTCACTTAAGACCGGATGACAAGTACGAATTCTCAGAGCCAAGCAAAATTCAGAGTTTGGTGAAGAATTACTCGCAATTTGTTTCCTTCCCCATCTTTACATGGCAAGAAAAGTCTAGAACCGTGGAGgtggaagaggaagaagaaccTAAAGAAGGCGAAGAACCAAAAACAGAGGGTGATATAAAGAAGacaaaaaagactaaaactgAGAAGTATTGGGATTGGGAATTAGCCAATGAGACAAAGCCAATATGGATGCGGAGTTCAAAGGATACCGATAAGGAGGAGTATAACGAGTTCTACAAGAAGACTTTTAATGAGTTCTTAGAACCACTTGCATATACTCACTTCACTACTGAgGGTGAGGTTGAGTTCAGAAGCATTTTGTATATTCCAAGTATGGGACCTCTCAACAATGAAGAAGTAGTGAGCCCTAAAACAAAGAACATACGCCTGTACGTAAAGCGTGTGTTCATCTCAGATGATTTTGATGGTGAACTGTTTCCACGTTACTTGAGCTTTGTGAAGGGTGTGGTTGATTCAAATGACCTTCCTCTGAACGTTTCCCGAGAGATCCTTCAAGAAAGCAGAATTGTAAGGATAATGAGAAAGAGACTTGTTAGGAAGACATTTGATATGATTCAAGATCTCGCTGAAGGTGAAAATAAGGAGGATTACAAAAAATTCTGGGAGAACTTTGGTAGGTTTATTAAGTTGGGATGCATTGAAGACAGTGGAAATCATAAGCGCATAACACCGCTGTTGAGGTTTTACAGTTCCAAAAGCGAGGATGAACTTAAAAGCCTAGATGAGTATGTGGAAAATATGGGTGAAAACCAAAAGGCTATCTATTACCTAGCAACTGACAGCTTGAAAAGTGCAAAGTCTGCTCCGTTTTTAGAGAAATTGCTTCAAAAAGATATCGAGGTTCTTTATTTGGTTGATCCTATTGATGAGGTTGCAATTCAGAATCTACAGACatacaaagaaaagaaatttgttGATATCAGCAAGGAAGATTTGGAATtggGTGATGAGGACGAGGTCAAAGATAGGGAAAACAAACAAGAATACAATCTACTTTGTGATTGGATAAAACAACAGCTTGGTGATACCATTGCAAAAGTTCAAGTCTCCAAGCGTTTGAGCTCATCTCCATGTGTGCTTGTCTCTGGCAAGTTTGGTTGGTCTGCAAATATGGAGAGAATAATGAAGGCACAGGCTCTTGGAGACCAGGCAAGTTTGGAGTTTATGAGAGGGAGGAGAATATTGGAGATTAATCCAGATCATCCCATTATCAAAGATTTAAGTgcTGCCTGCAAGAATGCCCCTGACAGCAGCGAAGCAAAGAGAGCTGTTGAACTCTTATACGACACAGCACAAATTTCCAGTGGATTTTCACCGGAGAGCCCTGCCGAGTTGGGAAATAAAATCTATGGAATGATGGAGTTGGCCTTGGGAGGAAGATGGGGTAGAGCAGATGAGGAGGGAGATGCACCAGCTGATGCTGATTCAAAGGAAAATGCGAGTACAGAAACTGAAGTTTTTGAACCATCTGAAGTCATAGCCGAAAATGATCCTTGGACAACAGATTAG 2379 0.4107 MAPVLSRTMAATASLASLPSSSSFSLSRPSSALRRTAFLPPQPPRRKCLSSTTALKCKHQARRGRLSVRCEAAVAEPEEATGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGEAGELEIRIKPDPDNGTITITDTGIGMTKEELVDCLGTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVADRVIVSTKSPRSDKQYVWEAVADSSSYVIREETDPEKVLRRGTQITLHLRPDDKYEFSEPSKIQSLVKNYSQFVSFPIFTWQEKSRTVEVEEEEEPKEGEEPKTEGDIKKTKKTKTEKYWDWELANETKPIWMRSSKDTDKEEYNEFYKKTFNEFLEPLAYTHFTTEGEVEFRSILYIPSMGPLNNEEVVSPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDLAEGENKEDYKKFWENFGRFIKLGCIEDSGNHKRITPLLRFYSSKSEDELKSLDEYVENMGENQKAIYYLATDSLKSAKSAPFLEKLLQKDIEVLYLVDPIDEVAIQNLQTYKEKKFVDISKEDLELGDEDEVKDRENKQEYNLLCDWIKQQLGDTIAKVQVSKRLSSSPCVLVSGKFGWSANMERIMKAQALGDQASLEFMRGRRILEINPDHPIIKDLSAACKNAPDSSEAKRAVELLYDTAQISSGFSPESPAELGNKIYGMMELALGGRWGRADEEGDAPADADSKENASTETEVFEPSEVIAENDPWTTD 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02389 792 MobiDBLite consensus disorder prediction 753 792 - -
Tsu05g02389 792 CDD HATPase_Hsp90-like 92 288 - -
Tsu05g02389 792 SUPERFAMILY HSP90 C-terminal domain 622 743 IPR037196 -
Tsu05g02389 792 Gene3D - 513 599 - -
Tsu05g02389 792 ProSitePatterns Heat shock hsp90 proteins family signature. 103 112 IPR019805 GO:0005524|GO:0006457|GO:0051082
Tsu05g02389 792 Pfam Hsp90 protein 270 770 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu05g02389 792 PANTHER HEAT SHOCK PROTEIN 90-5, CHLOROPLASTIC 24 783 - -
Tsu05g02389 792 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 24 783 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu05g02389 792 PRINTS 90kDa heat shock protein signature 83 103 IPR020575 -
Tsu05g02389 792 PRINTS 90kDa heat shock protein signature 104 126 IPR020575 -
Tsu05g02389 792 PRINTS 90kDa heat shock protein signature 153 170 IPR020575 -
Tsu05g02389 792 PRINTS 90kDa heat shock protein signature 171 188 IPR020575 -
Tsu05g02389 792 PRINTS 90kDa heat shock protein signature 200 222 IPR020575 -
Tsu05g02389 792 PRINTS 90kDa heat shock protein signature 255 272 IPR020575 -
Tsu05g02389 792 PRINTS 90kDa heat shock protein signature 274 292 IPR020575 -
Tsu05g02389 792 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 83 298 IPR036890 -
Tsu05g02389 792 SUPERFAMILY Ribosomal protein S5 domain 2-like 342 600 IPR020568 -
Tsu05g02389 792 MobiDBLite consensus disorder prediction 302 324 - -
Tsu05g02389 792 Gene3D - 71 313 IPR036890 -
Tsu05g02389 792 MobiDBLite consensus disorder prediction 753 774 - -
Tsu05g02389 792 PIRSF HSP90_HTPG 46 785 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu05g02389 792 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 106 265 IPR003594 -
Tsu05g02389 792 Gene3D - 600 747 IPR037196 -
Tsu05g02389 792 Hamap Chaperone protein HtpG [htpG]. 80 744 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu05g02389 792 Gene3D - 340 512 - -
Tsu05g02389 792 SMART HKATPase_4 105 267 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02389 Tsu-Chr5 31922183 31929384 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02389 K09487 - gmx:100819778 1281.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02389 05 31922183 31929384 Tsu05g02389 05 31922183 31929384 ECH