Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02219 ATGGGATATAACGCcagtaaaattaaaatgtttcaGCCATTTTCATTTCGTTGTTCCAACCATGCTTCTACGACGCCGTTTCCTTCCCTATTCCTCCTTAATACTACGTCGTTTCACCTCTCCGGTCAATCTCTCACTTTTCCATTTTCCCGCCGGCAGTTCAATCCACCCGCACTCCGGTCGGTTCCCCCTGTGAGAGCTGTTTTCTCCTCTTCACCGCTCTTCGATATCAGCGGAGGGAAAGGCAGTGGGTTCTTTGATGTTGAACTAAAAGTTCGTGATTATGAGTTGGATCAGTTTGGTGTGGTCAACAATTCAGTTTATGCTGGTTATTGCCAACATGGTCGTCATGAATTCTTGGAAAGCATTGGTATTAATTGTGATACCGTCGCTCGAAGTGGTGAAGCATTGGCCTTGTCAGAACTATCCTTCAAATACCTTGCACCTCTAAGAAGTGGAGACAAATTTGTCGTAAAGGTTAGGATTTCTGGCTCCTCGGCTGCTCGTATACACTTTGATCACTTCATCTATAAACTACCAAACCAAGAGCCTATTTTGGAAGCTAGGGCCACGGCGGTGTGGCTTGACAAAAACTATCGTCCTATTCGAATCCCGGCAGATATTAGGTCTAAATTTGTTAAACTTATTCGTAGTGAGGACTCATAA 666 0.4354 MGYNASKIKMFQPFSFRCSNHASTTPFPSLFLLNTTSFHLSGQSLTFPFSRRQFNPPALRSVPPVRAVFSSSPLFDISGGKGSGFFDVELKVRDYELDQFGVVNNSVYAGYCQHGRHEFLESIGINCDTVARSGEALALSELSFKYLAPLRSGDKFVVKVRISGSSAARIHFDHFIYKLPNQEPILEARATAVWLDKNYRPIRIPADIRSKFVKLIRSEDS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02219 221 CDD 4HBT 86 196 - -
Tsu05g02219 221 Gene3D Hotdog Thioesterase 80 216 - -
Tsu05g02219 221 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 84 217 IPR029069 -
Tsu05g02219 221 Pfam Thioesterase-like superfamily 95 211 - -
Tsu05g02219 221 PANTHER 4-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER 48 221 - -
Tsu05g02219 221 PANTHER ACYL-ACYL CARRIER PROTEIN THIOESTERASE ATL1, CHLOROPLASTIC-RELATED 48 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02219 Tsu-Chr5 28612908 28616678 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02219 - - aprc:113869725 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02219 05 28612908 28616678 Tsu05g02219 05 28612908 28616678 ECH