Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02194 ATGAAGTTAAGAGATGGAAGTTTAATCACTTTTTTATTGCTATTGTGCTTAACAAATCTTTCTCTAAAATCAGATGCTGTGTGGTTAACCATTCCCAGTTCAGGAACTAAATCTAAGTGTGTGTCTGAGGAAATTCAAACACATGTGGTTGTTTTAGCTGATTACTATGTTGTATCTGATGAAGGTCAACACACAATTACCGCAAAgGTAACATCTCCGTACGGAAACGAGCTGCACCATAATGAAAATGTTACACAAGGGCAGTTTGCATTTACAACTACCGAAAGTGGAAACTATGTGGCATGCTTTTCGATGGTTGGTACACAACAAGAAGGTACTGCAAGTGTCAGCCTTGATTGGAAAACTGGAATTTCAGCCAAGGATTGGGATTCTgttgcaaagaaagaaaagattgAGGGTGTCGAACTTGAAGTCAGGAAGCTTGAAGGAATAGTGGATGCCATCCACCAGTATCTAATTTATTTGAAGGATAAGGAAGCAACAATGAGGGAAGTGAGTGAAAAAACAAATGCTAGAGTGGCTTGGTTTAGCATCATGTCTCTTGGTCTCTGCATTTTGGTTTCGGCATTGCAGATTTGGTATCTGCAAAGCTACTTTCGAAAGAAGAAGCTGATATAG 639 0.3803 MKLRDGSLITFLLLLCLTNLSLKSDAVWLTIPSSGTKSKCVSEEIQTHVVVLADYYVVSDEGQHTITAKVTSPYGNELHHNENVTQGQFAFTTTESGNYVACFSMVGTQQEGTASVSLDWKTGISAKDWDSVAKKEKIEGVELEVRKLEGIVDAIHQYLIYLKDKEATMREVSEKTNARVAWFSIMSLGLCILVSALQIWYLQSYFRKKKLI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02194 212 Pfam emp24/gp25L/p24 family/GOLD 34 207 IPR009038 -
Tsu05g02194 212 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 7 212 IPR015720 -
Tsu05g02194 212 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 7 212 - -
Tsu05g02194 212 ProSiteProfiles GOLD domain profile. 38 147 IPR009038 -
Tsu05g02194 212 SMART EMP24_GP25L_2 26 207 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02194 Tsu-Chr5 28177458 28181200 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02194 K20352 - gmx:100799948 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02194 05 28177458 28181200 Tsu05g02194 05 28177458 28181200 ECH