Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02189 ATGGCGAGACCAAACCCACAGTATGCTTTCTCACTCACACTCCTCACTCTCGTCCTTTCATCCACCACAACCCTCACCGCAACTCACGAACAACAAAACGACAACCCAATCACCCGTTTCCAACGCTACCTCCAAATCAACACAGCACACCCAACTCCAGACTACACCTCCGCCATATCATACCTCATCTCCCAAGCAAACTCCATCGGTGGAATCCTTCACAAAACCCTAGAATTCTCTCCAGGTAAACCTCTCCTCTTACTCACATGGcctggttctgattcttcactTCCTTCCATTCTCCTCAACTCTCATCTCGATTCCGTACCTGCTGAACCCTCCAAATGGCTACATCCTCCTTTCTCCGCTACTCGCACTTCCGACGGCGATATCTTTGCCCGTGGTGCACAGGATGATAAATGTATTGCTATGCAGTATCTTGAAGCAATCCGTAATCTCCGTAGTAACGGATTTGTTCCTGTTCGGTCTGTTCACATCTCGCTTGTTCCTGATGAGGAGATTGGTGGATTCGGTGGCGCGGCGAAGTTTGTTGATTCAGAGGAATTTGAGAAGCTTAATGTTGGATTTGCTCTTGATGAAGGACAGGCTTCTCCAGGGGATGAATTTAGGGTTTTTTATTCGGATCGGATTCCGTGGAATTTGAAGATTAAGGCTATTGGACGACCGGGTCATGGTTCCACGTTGTATGATGGTAGTGCTATGGAGAGTTTGATGAAGAGTGTTGAGATTGTGAGTAGGTTTAGGGAGAGTCAGTTTGAGGTTGTTAAGGCTGGGAAGGCTTTGAATTCTGAGGTTGTTTCGGTTAATCCTGTTTATCTCAAAGCTGGAGTTGCCACTCAAGATGGGTTTGTGATGAATGTGCAACCTTCGGAGGCAGAAGCTGGTTTTGATCTTAGGTTGACCCCTACGACGGACCCTGAGGAAATGAAGAGGAAAATTGCTACTGAATGGGCGCCATCTGTTAGAAATATGTCATATGAGGTGAGCTATCTAAAGGAAAATCTgttatttgttttgtatttttattcaagaatgaatatattttttttagaagttaaGGGAGTTTCTATAGGTCGAACTAGTAGATAG 1110 0.4342 MARPNPQYAFSLTLLTLVLSSTTTLTATHEQQNDNPITRFQRYLQINTAHPTPDYTSAISYLISQANSIGGILHKTLEFSPGKPLLLLTWPGSDSSLPSILLNSHLDSVPAEPSKWLHPPFSATRTSDGDIFARGAQDDKCIAMQYLEAIRNLRSNGFVPVRSVHISLVPDEEIGGFGGAAKFVDSEEFEKLNVGFALDEGQASPGDEFRVFYSDRIPWNLKIKAIGRPGHGSTLYDGSAMESLMKSVEIVSRFRESQFEVVKAGKALNSEVVSVNPVYLKAGVATQDGFVMNVQPSEAEAGFDLRLTPTTDPEEMKRKIATEWAPSVRNMSYEVSYLKENLLFVLYFYSRMNIFFLEVKGVSIGRTSR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02189 369 Gene3D Zn peptidases 26 220 - -
Tsu05g02189 369 PIRSF ACY-1 26 358 - -
Tsu05g02189 369 PANTHER AMINOACYLASE-1 14 335 - -
Tsu05g02189 369 Pfam Peptidase dimerisation domain 220 322 IPR011650 -
Tsu05g02189 369 Pfam Peptidase family M20/M25/M40 101 200 IPR002933 GO:0016787
Tsu05g02189 369 Gene3D - 221 328 - -
Tsu05g02189 369 SUPERFAMILY Zn-dependent exopeptidases 25 216 - -
Tsu05g02189 369 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 136 175 IPR001261 -
Tsu05g02189 369 SUPERFAMILY Bacterial exopeptidase dimerisation domain 220 337 IPR036264 -
Tsu05g02189 369 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 27 337 IPR010159 GO:0004046|GO:0005737|GO:0006520
Tsu05g02189 369 PANTHER PUTATIVE-RELATED 14 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02189 Tsu-Chr5 28111696 28114722 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02189 K14677 - gmx:100817383 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02189 05 28111696 28114722 Tsu05g02189 05 28111696 28114722 ECH