Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02181 ATGGAAACACCAAAAAACAAGAGCCAAACAAAGCTCACCCGAACCAAATCCTCGCTGCTTCGGTGTTCTTCTCCAACCAACCGATCCTCCATTCCGAGCCTCGGTTCCGTTAACGAAGACGATTTTTACGTCGAAGAGGAAGAAGAtaagaacaagaagaaaaacaaaaacaaaaacaaaaacaataataatacttattacaataagaagaagaagaacggGTTCGGTTCCGGTTCAGGTTTGGGTTCGATCCGGTTTGTGGCGGTTCCAATTCTAGGTTTTTTCAGCGGGTGTTCGTTCTTCTtctatgtgttttatttttcctatatCGGTTCAGTGGGACCCACTTCCGAGAACGTGTTACTGATTCTAATTTTTCTAGCTGTAGTGCTTTACTTGTTAAACAGAAACAAACGTGTGATTCAAAGAAGCATTTCAGTTTTGAAGCATTCATGGGATGGGAATTTAAAACGACTTGGGTTTTGTTCAAAAGGAAGTGCTAAACCGGTTCAATGGTTCATTGGGGAAACCGGTTCAGTtgatgagaagaaagaaaaagggtTAGGGAAAGAAGGTGTTGAGTTTTATAGCAATGGTGATTTTTATGAAGGTGAATTTCATGGTGGAAAGTGTAATGGAAGTGGTGTTTATCATTACTATGGTAGTGGAAGATATGAAGGTGATTGGGTTGATGGAAAATATGATGGTTATGGAATTGAGAATTGGGCTAGAGGAAGTAGATATAAGGGTTATTATAGACAAGGTTTGAGACATGGTTATGGTGTTTATAGATTTTATACTGGTGATTCTTATTCTGGTGAATGGTGTAATGGACAGAGTCATGGTTTTGGTGTTCAATCTTGTTCTGATGGTAGTTGTTATGTTGGTGAATTTAAGTTTGGTGTTAAACATGGTTTTGGATGTTACCACTTTAGAAATGGAGATAGATATACAGGGGAGTATTTTGGCGACAAAATTCATGGATTTGGGGTCTACTATTTTGCGAATGGACACTGTTATGAAGGAGCGTGGCATGAAGGTCGTAGGCAAGGTTATGGTGTTTATACTTTTCGAAATGGAGACCGGAGGTGTGGCGAATGGGATGGTGGTAACCTCAAACACTCTCTACCACCACTAAATCCTGCTGTCCTTACATCAGTTCAGGCTGCTAGGAGAACAGCTGAAAATGCTATAAACCTTCCTCGGAACGATAACCAAGTTAACAATGCAGTAAACGCCGCAAACAGGGCCGCCACAGCTGCTAGAGTTGCAGCAGTGAAAGCTGTTCAAAATAGAATGGGTGGAAAATTTTGTAATGATCAAGTTTAA 1329 0.377 METPKNKSQTKLTRTKSSLLRCSSPTNRSSIPSLGSVNEDDFYVEEEEDKNKKKNKNKNKNNNNTYYNKKKKNGFGSGSGLGSIRFVAVPILGFFSGCSFFFYVFYFSYIGSVGPTSENVLLILIFLAVVLYLLNRNKRVIQRSISVLKHSWDGNLKRLGFCSKGSAKPVQWFIGETGSVDEKKEKGLGKEGVEFYSNGDFYEGEFHGGKCNGSGVYHYYGSGRYEGDWVDGKYDGYGIENWARGSRYKGYYRQGLRHGYGVYRFYTGDSYSGEWCNGQSHGFGVQSCSDGSCYVGEFKFGVKHGFGCYHFRNGDRYTGEYFGDKIHGFGVYYFANGHCYEGAWHEGRRQGYGVYTFRNGDRRCGEWDGGNLKHSLPPLNPAVLTSVQAARRTAENAINLPRNDNQVNNAVNAANRAATAARVAAVKAVQNRMGGKFCNDQV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02181 442 MobiDBLite consensus disorder prediction 10 36 - -
Tsu05g02181 442 Pfam MORN repeat 202 220 IPR003409 -
Tsu05g02181 442 Pfam MORN repeat 294 316 IPR003409 -
Tsu05g02181 442 Pfam MORN repeat 225 247 IPR003409 -
Tsu05g02181 442 Pfam MORN repeat 271 292 IPR003409 -
Tsu05g02181 442 Pfam MORN repeat 248 269 IPR003409 -
Tsu05g02181 442 Pfam MORN repeat 317 338 IPR003409 -
Tsu05g02181 442 Pfam MORN repeat 340 362 IPR003409 -
Tsu05g02181 442 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 196 292 - -
Tsu05g02181 442 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 19 436 - -
Tsu05g02181 442 SMART morn 246 267 IPR003409 -
Tsu05g02181 442 SMART morn 223 244 IPR003409 -
Tsu05g02181 442 SMART morn 338 359 IPR003409 -
Tsu05g02181 442 SMART morn 269 290 IPR003409 -
Tsu05g02181 442 SMART morn 292 313 IPR003409 -
Tsu05g02181 442 SMART morn 315 336 IPR003409 -
Tsu05g02181 442 SMART morn 200 221 IPR003409 -
Tsu05g02181 442 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 19 436 - -
Tsu05g02181 442 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 267 370 - -
Tsu05g02181 442 MobiDBLite consensus disorder prediction 1 70 - -
Tsu05g02181 442 Coils Coil 43 64 - -
Tsu05g02181 442 Gene3D - 277 323 - -
Tsu05g02181 442 Gene3D - 324 377 - -
Tsu05g02181 442 Gene3D - 178 231 - -
Tsu05g02181 442 Gene3D - 232 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02181 Tsu-Chr5 27890246 27892814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02181 198 376 Acyl Lipid Metabolism Gene Families AT1G21980 37.989 1.25e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02181 - - gmx:100806547 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02181 05 27890246 27892814 Tsu05g02181 05 27890246 27892814 ECH