Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02159 ATGCCTCCTCATCCGTCCTCCATCTCGGCGAGATCCGAATCATCTCCAAGCCACATCATCAACTACAGTATCTCCAACGGTGGCGATTGCAGCCGTAGAAGTCATCAACAACAGCAATTGGTGGTTCCAACGGCGATTGACGTTAGGATTAACGACCTGGTTGGGAATGGAATATCAGGAATACTACAGAAATGGGTGAACTATGGTAGAGGATGGAGGCATCGGTGGTTCGTGCTGCAAGATGGCGTTCTCTCTTATTACAAGATTCATGGAAATGATAAGATCGTAATCAATCCTGAAACCGAGAAGGGATTCAAGGTTATTGGTGATGAATCCATGCGTATTATCTCTCGCAACCGCAATTCTCACCACTCTCAAAATCAGCGAAAGGCTTTCGGTGAAATCCACCTCAAGGTTTCAACTATTCGCGAGAGCAGATCAGATGATAAACGGTTTTCCATTTTCACTGGTACAAAGACACTGCACTTGAAAGCAGAAACTCGTGAAGATCGAGTGGCATGGTTGGAGGCCTTGCATGCAGTTAAAGATATGTTTCCCCGGATGTCCATCAGTGAGCTGATGGCTCCGGTGGACTATTTGGCCATTTCAACTGAAAAGCTGAGGCATCGGCTTATGCAAGAAGGTGTTAGTGAGGCAGCCATCCAGGATAGTGAGCAAATTATGAGAAATGAGTATGCAGCTCTACAAAACCAGCTTTTGCTACTTAAGCAAAAGCAGTTGGCACTAATTGACAATTTACGCCACTTGGAGACAGAGAAGGTTGACCTGGAAAACACTGTAGTTGATGAGAGCCAAAGAAAATGGAATGATCAAGAGGCTTCTTCCACAATGAGGCAGGAAAAGTTTGGTGAAATTGGTGCAAGTGGGTCTGACGATGATAATGAGAGAAATGACGTAGCAGAGGAAGATACAGACGACGATGATGATGCCGCCTTTTTTGACACACGTGATTTTATATCATCATCCAGTTCTATTAAAAGTAAGACTTCATCCTTTTCTTCAGATGATGAAGGAATCTCTGTAGTTGGATCCGAGGGGGATATAGATCCTTCTATTAGATCTGTTGGGACGAACTATCCTCGCGTTAAGCGGCGTAATAAATTGCCTGAACCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCATTGATTAAGGATAATATTGGGAAGGATCTAACTAAAGTCTGCCTCCCTGTTTATTTTAATGAACCTCTTTCCTCACTTCAAAAATGCTGTGAAGAAATGGAGTACTCATATCTCCTTGACCGAGCTTATGAATGGGGAAGAAGAGGCAATACGCTTATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGATGGGAGAATTTGCAAACCTTTTAATCCATTACTGGGGGAGACATATGAGGCCGACTTTCCAGATAAAGGCTTTCGTTTCATCTCTGAGAAGGTTAGTCACCACCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCAGATAGCAACTTAAAGAGCAAATTTTGGGGGCGATCAATTCAACTTGATCCTGTTGGTATTTTGACATTAGAATTTGATGACGGTGAAGTATTTCAGTGGAGCAAGGTTACTACATCAATATACAATCTCATTTTGGGAAAGCTGTATTCTGATCATTATGGTACAATGCGCATTCAGGGAAACAAAGAATATTCATGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGCAATCCTCACCAGGTTCAAGGTATTGTTCAGGACAGAAATGGGAAAACATTGGCTACCTTAATTGGAAAGTGGGATGAAAGCATGTATTATGTTAATGGAGATTATGGTGGAAAGGGAAAAGGTTATGAATCGTTTTCTGAAGCACATATACTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCTACTAGATATAACTTAACTCGTTTTGCTATCACATTAAATGAACTAACCCCAGGATTAAAGGTGTGTACTTTTTACTGA 2025 0.4188 MPPHPSSISARSESSPSHIINYSISNGGDCSRRSHQQQQLVVPTAIDVRINDLVGNGISGILQKWVNYGRGWRHRWFVLQDGVLSYYKIHGNDKIVINPETEKGFKVIGDESMRIISRNRNSHHSQNQRKAFGEIHLKVSTIRESRSDDKRFSIFTGTKTLHLKAETREDRVAWLEALHAVKDMFPRMSISELMAPVDYLAISTEKLRHRLMQEGVSEAAIQDSEQIMRNEYAALQNQLLLLKQKQLALIDNLRHLETEKVDLENTVVDESQRKWNDQEASSTMRQEKFGEIGASGSDDDNERNDVAEEDTDDDDDAAFFDTRDFISSSSSIKSKTSSFSSDDEGISVVGSEGDIDPSIRSVGTNYPRVKRRNKLPEPVEKEKGVSLWSLIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNTLMRILNVAAFAVSAYASTDGRICKPFNPLLGETYEADFPDKGFRFISEKVSHHPMIVACHCEGTGWKFWADSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYSDHYGTMRIQGNKEYSCKLKFKEQSIIDRNPHQVQGIVQDRNGKTLATLIGKWDESMYYVNGDYGGKGKGYESFSEAHILWKRSKPPKFPTRYNLTRFAITLNELTPGLKVCTFY 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02159 674 Pfam Oxysterol-binding protein 386 667 IPR000648 GO:0008289
Tsu05g02159 674 ProSiteProfiles PH domain profile. 55 183 IPR001849 -
Tsu05g02159 674 SUPERFAMILY PH domain-like 58 183 - -
Tsu05g02159 674 MobiDBLite consensus disorder prediction 302 318 - -
Tsu05g02159 674 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 12 669 IPR000648 GO:0008289
Tsu05g02159 674 SUPERFAMILY Oxysterol-binding protein-like 381 652 IPR037239 -
Tsu05g02159 674 MobiDBLite consensus disorder prediction 272 318 - -
Tsu05g02159 674 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 12 669 - -
Tsu05g02159 674 Pfam Pleckstrin homology domain 64 179 - -
Tsu05g02159 674 Coils Coil 253 273 - -
Tsu05g02159 674 SMART PH_update 56 185 IPR001849 -
Tsu05g02159 674 Gene3D - 56 185 IPR011993 -
Tsu05g02159 674 Coils Coil 225 245 - -
Tsu05g02159 674 Gene3D - 472 646 - -
Tsu05g02159 674 MobiDBLite consensus disorder prediction 332 363 - -
Tsu05g02159 674 CDD PH_ORP_plant 58 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02159 Tsu-Chr5 27238803 27245214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02159 K20456 - gmx:100817212 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02159 05 27238803 27245214 Tsu05g02159 05 27238803 27245214 ECH