Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02119 ATGGCGAGAAAAACCAGCAATTGCGCCATATGTGAGAATTCAAATCAGCCTTCTATATGTTCTATTTGTGTCAACTACAGGTTAAATGAGTATAACACTTCGTTGAAATCATTGAAAGATCGTCGAGATTTATTGTACTCAAAATTGAGCGAAGTTCTTGTCCGTAAGGGAAAGGGAGACGATCAAACAAATTGGAGAGTGCTTCGACATGAAAAGCTTGCAAGGTTGAGGGAGAAGCTCCGTCATAGTAAAGAACAAGCTACTCAAGGAAGAGCTAAGATAGAGGCCTTGTCCGCTGATCTGAAACTTAAATATGGAGTGCTTGAATCTGCACTTTCTATGTTGGAAAAGAATCGAGTGGAACAACTGGAGAAGTTCTACCCTAATCTTATAGGCACCCAGAGCTTAGGGCATGTGGCAATTACCTCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAACAGATATGCAAGTTGTTTCCACAACGCCGGGTAGTTGTAGAGGGAGAGAAGAGGGATGATTGTAGTGGTCAATATGATCAAATTTGCAATGCACGCTTACCAAGAGCACTTGATCCACATTCTGTTCCATCAGAAGAGCTTTCTGCATCTTTAGGATACATGGTTCAACTTCTAAACCTTGTTGTTCACAACTTGGCTGCCCCAGCACTTCATAACTCAGGTTTTGCGGGATCTTGCTCCCGAATATGGCAACGAGATTCTTATGGTGATGCACGGCCTTCCACCAGGAGCAATGAATATCCTCTTTTTATACCTCGCCAAAATTATTGCTCGACCAGTGGGGAAAACTCATGGACTGATAAAAGTTCAAGCAATTTCGGTGTCGCATCAATGGAATCTGACAGGAGGCCTCGTCTGGATTCATCTGGGAGTAGTAGCTTTAACTATTCTTTAGCTTCTTCGCATTCTGTTCAATCACACAAAGATCTGCAGAAAggaatttcacttttaaagaAAAGTGTAGCATGCATTACTGCATATTGTTACAACTCCCTATGTTTGGATGTCCCTTCGGAGGCATCTACGTTTGAAGCATTTGCGAAGTTATTGGCTACTCTTTCCTCATCCAAGGAAGTTCGATCTGTGTTCTCCTTGAAAATGGCTAGCTCTAGGACATGCAAACAAGCTCAACAATTGAACAAATCTGTATGGAATATGAACTCTGCTATTTCCTCAACTACTTTGCTGGAAAGTGCACATTCTGTGCCCACAATGGTATATcttttctcatattttttaatttga 1266 0.4068 MARKTSNCAICENSNQPSICSICVNYRLNEYNTSLKSLKDRRDLLYSKLSEVLVRKGKGDDQTNWRVLRHEKLARLREKLRHSKEQATQGRAKIEALSADLKLKYGVLESALSMLEKNRVEQLEKFYPNLIGTQSLGHVAITSERLHKQSVVIKQICKLFPQRRVVVEGEKRDDCSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYGDARPSTRSNEYPLFIPRQNYCSTSGENSWTDKSSSNFGVASMESDRRPRLDSSGSSSFNYSLASSHSVQSHKDLQKGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMASSRTCKQAQQLNKSVWNMNSAISSTTLLESAHSVPTMVYLFSYFLI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02119 421 Coils Coil 73 93 - -
Tsu05g02119 421 MobiDBLite consensus disorder prediction 268 284 - -
Tsu05g02119 421 PANTHER DNA-DIRECTED RNA POLYMERASE II PROTEIN 1 412 - -
Tsu05g02119 421 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
Tsu05g02119 421 MobiDBLite consensus disorder prediction 268 296 - -
Tsu05g02119 421 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 1 412 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02119 - - mtr:MTR_5g061040 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02119 05 26080430 26086440 Tsu05g02119 05 26080430 26086440 ECH