Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01978 ATGTCGGAAGGAAAGACATCAACATTATCAAAATCGGCTATATGGTTTTCAATATTGGGACTCATCATCATTTTTGAGATAACTATGGTACGAGATTCAACTAGGCTAATGCTATCAATTCCAAAGTGGAATTGGGATTTTGAAGTTAATAAAACTGCACTTATCACATGTGATCGTTCTAATCAAACTTATGATATATGTACAATAAATAGTCCAACACTTTTAGACCAAAATTCATTGACTCTTTTTACATTGGGTCCTCATTTGAGAATTCAACCTAACATCCATATGAAAATCCAACCTTACCCTcttaaaaatgatgaaaatgcaATATCCCCTGTTAGTGAATTCACTCTCACATCAACTCCACCAAAATCATCTTGTGGTGTCACACATCATAGTCCAGCACTAGTTTTCAGTGTAGGTGGGTACAGTGGTAATTTCTACCATGATATAAATGAAATTTTCATACCTATCTTTATAACCATTAATTCTTTATCCAATGGTCAAGATGTAATACTTGTGATCACAGATGTTAAACCTGGATGGTTTGAAAAGTATGTTGATTTATTATCTACATTTAGTCCTAACCACATGATCATCAACACAAGTAACCTAACAACCACTCATTGTTTTCCATCAGCAATTGTAGGTTTGATAAAACATGGACAAATGATCATAAACCCTAAATTGCTACCAAACCCTAAAACCCTCCTTGATTTTCATGAATTCCTTGAAAGTGCATATATGAAAGAGAAAACTCCATTAATATTTCCCAACAATAAGGATAAGCCTATTCTCACATTGGTGAGTAGAAAAGGTGCTAGCCGTGAGATTTTGAACCAAGATGAAGTCATCAAGTTAGCTGAAGATATAGGATTTGATGTACATGTTTTGGAGTCATCAATAGATTCCACTGTAGCTGATGCTTTTAGGTTGATATATTCAAGCAATGTAATGTTAGGGGTGCATGGTGCAGGTTTAACAAATTTAGTGTTCCTTAAACAAGGATCAGTGTTGGTTCAAGTGGTTCCTATTGGACTTGAATGGGCCTCAGAAACATATTATAACAAACCAACTAAGAGTTTGGGGGTGGAATATGTAGAATACAAAATAGAGGCTAATGAAAGTAGTTTGTCATGGGAATATGGAGCTGATAGTATAGTGATCAAGAATCCAAATGCTTTTCGTGAGGGAAATTGGTCTAGGCATCAAGCTGTATACTTGAAGGGACAAAATGTGAAGATTGATATAATTAGATTTAGAAAATGTTTGACAAAAGTGTATGAAAAGGCCAAGAAATTTATTCATAGTACTAGTTAG 1323 0.3401 MSEGKTSTLSKSAIWFSILGLIIIFEITMVRDSTRLMLSIPKWNWDFEVNKTALITCDRSNQTYDICTINSPTLLDQNSLTLFTLGPHLRIQPNIHMKIQPYPLKNDENAISPVSEFTLTSTPPKSSCGVTHHSPALVFSVGGYSGNFYHDINEIFIPIFITINSLSNGQDVILVITDVKPGWFEKYVDLLSTFSPNHMIINTSNLTTTHCFPSAIVGLIKHGQMIINPKLLPNPKTLLDFHEFLESAYMKEKTPLIFPNNKDKPILTLVSRKGASREILNQDEVIKLAEDIGFDVHVLESSIDSTVADAFRLIYSSNVMLGVHGAGLTNLVFLKQGSVLVQVVPIGLEWASETYYNKPTKSLGVEYVEYKIEANESSLSWEYGADSIVIKNPNAFREGNWSRHQAVYLKGQNVKIDIIRFRKCLTKVYEKAKKFIHSTS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01978 440 Pfam Glycosyltransferase 61 253 341 IPR007657 GO:0016757
Tsu05g01978 440 PANTHER GLYCOSYLTRANSFERASE 19 437 IPR007657 GO:0016757
Tsu05g01978 440 PANTHER GLYCOSYLTRANSFERASE 19 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01978 Tsu-Chr5 22666299 22669674 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01978 - - mtr:MTR_5g043230 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01978 05 22666299 22669674 Tsu05g01978 05 22666299 22669674 ECH