Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01956 ATGGAAGTGCCGTTGGAGATTCCAATTGGTGACGCAATTTCCAGAATTCAATTTGCGCCTAACTCTAACAATCTTCTAATTTCATCTTGGGATTCTAATCTTCGTTTGTATGATTTCGATGGTTCCGTTCTAAGACTTGAAGCTCCTTCAGAAGCTGCTCTGCTCGATTGTTGCTTCCAACAAGATGATTCCGTTGCTTTCACTGTTGCTTCTGATGGATTCATCCGAAgGTATGACTTGCATTCTGGAATTATTGACCCAATGGGTAATCATGATGACATGGCAACATGCATTGGATATTCCAATGAAACATGTCTGTTAATTACTTCTGGATTTGACAAGAGGTTATTGTCATGGGACAATCGTACGAAAAAACATTTTTCACTGTCGATGACTCTAGATGCAGAGATTGACTCCATGTCTCTCAATGGGTTTAAGGTTACTGTAGGCATTGGAGCATCTGCCCATGTATATGATTTACGCAAATTTGACAAACCAAATCTATCAATGGAGCCCTGCAACGGTACACAATTAAGATGCGTCAGTTCAATACCTTATGCAGAAGGATTGGCAGTTGGATCAGTGGATGGACGGGTTGCATTGCATGTTTCCTCTTCATCTAATTCAAATGACATTGGATATACATTCCGGTGTCATCCAAAATCAAAGGATGGTCAGCATCATTTGGCACCTGTCAATGCCATTGCGTTCAGTCCACTTGTGTCTGGTGCATTTGTCACTGGTGACGATGAAGGGTATGCTACCATATGGGATGCTCGAAGTAAGAAACGACTAGTTGAGTTTCCCAGGTACTCAAATAGTGTTGCATCCTTATCTTACAACCATTTGGGGCAACTTCTAGCTGTAGCATCAAGTTATACTTACCAAGAAGCAAAAGAAATAGTAGAGCCTCCTAAAGTGTTTATCCGTAAAGTGGACAACATTGATTTCGGATCAAGTTCTGCTCGGAGGAAAACTTGA 981 0.4108 MEVPLEIPIGDAISRIQFAPNSNNLLISSWDSNLRLYDFDGSVLRLEAPSEAALLDCCFQQDDSVAFTVASDGFIRRYDLHSGIIDPMGNHDDMATCIGYSNETCLLITSGFDKRLLSWDNRTKKHFSLSMTLDAEIDSMSLNGFKVTVGIGASAHVYDLRKFDKPNLSMEPCNGTQLRCVSSIPYAEGLAVGSVDGRVALHVSSSSNSNDIGYTFRCHPKSKDGQHHLAPVNAIAFSPLVSGAFVTGDDEGYATIWDARSKKRLVEFPRYSNSVASLSYNHLGQLLAVASSYTYQEAKEIVEPPKVFIRKVDNIDFGSSSARRKT 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01956 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 267 IPR001680 GO:0005515
Tsu05g01956 326 SUPERFAMILY WD40 repeat-like 10 292 IPR036322 GO:0005515
Tsu05g01956 326 Gene3D - 2 312 IPR015943 GO:0005515
Tsu05g01956 326 SMART WD40_4 209 258 IPR001680 GO:0005515
Tsu05g01956 326 SMART WD40_4 81 120 IPR001680 GO:0005515
Tsu05g01956 326 SMART WD40_4 40 79 IPR001680 GO:0005515
Tsu05g01956 326 SMART WD40_4 1 38 IPR001680 GO:0005515
Tsu05g01956 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 88 129 IPR001680 GO:0005515
Tsu05g01956 326 PANTHER MRNA EXPORT FACTOR AND BUB3 4 317 - -
Tsu05g01956 326 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.3 4 317 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01956 K02180 - gmx:100798072 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01956 05 22316271 22320928 Tsu05g01956 05 22316271 22320928 ECH