Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01919 ATGTATTCTTCCCGAGGGAGTGGTGCTTACAGCCAATCCTACACGGGTCAATCTGCATATGGTCAAAAGTTGAGTGCTAATTATTCTGGGGCATCTATTGGAGGACATGATGCTACCCCACACTCTGCGGCTTCAAGGCATTCAGGTATATTAGGTAGTTCTCAGGATGCCGATGTTGGTAGTTATAGGGCTCACAATGCTGTTGCTCAGTATGGAGGACAGTATAGTTCTGTTTACGGTTCGGCAGCTATGAGTACCGCACAGCAGACTCCGTCTTTGAGTACCAAGGGAACTGGGTCATTAGCTTTAGATGCTCGTGGGGGCTACTCTTTGGGTGTTTCAGATTCACCCAAGTTTGCTTCTAGTGACTATTTATTGGCATCCTCAACCCATGGGTATGGCCACAAATCTGATCAATTGTATGGTGACAAGAGTTTGGATTATTCTGGATTAGATAGAAGGCAATATGGTGAACGTCAGAGTGGTTACATTGGTAGGGATTTATCAAGTGATCCAACTGGACGCTATGCTACTGATCCCGTTGGATATAATCATCAACATCAGGCCACTTTGCTTCGACAAGAGCAATTGCTGAAATCTGGGTCCCTGCAAGCTGCCTCACTGGATGGGGGTACAAGACAAACTGATTATCTTGCAGCTAGGGGTGTTGCAAGTCGTCACCCAACCCAAGATCTCATGTCTTATGGAGGAAGGATTGATTCTGAGCCCCATGCTTCATCAATGCTAAGTGCTACTTCATATAGCGGACAACATGCACCATCGATATTAGGAGCAGCACCAAGGAGAAATGTGGAAGATCTCTTGTATTCACAGAATGCATCAAATCCTGGTTATGGAGTGAGCCTGCCACCCGGTAGGGACTATGCCAGTGGAAAAGGTATACATGGAAATGCTATGGATTTGGATTACCCAGCAAATTTGATGTCACATGGTGGCTCTACGGATAGGAAGGATGATCGGACTAGCTATCTTCGAGATTTTGAATTAAGAGAAGAAGAACGACGTCGGGACCGCTTGCGTGGTAGAGATAGGGACAGAGAAAGGGACAAAGAACGAGAACGATTGCGAGAACGAGATCGAGATCGAGAGAAGGAACGCGAGAAGGAGCGCATGGAGCGGCGTGAAAAGGAGAGGGAGCGTGATCGCAAACGTGCACTTGAAGTTAAGCTTGAACGAACTCCAGTGAGATCCTCCAAGGATCCACGTAATACTTCAAAGGTTCCTCGCGGGTCCTCTTTGACAAAGGAGGCGAAATCTTCACGACGGGACTCCCCACATCGTGGCGCTTCACATAGGAACCGTTCACCTGTGAAAGAAAAACGTAGAGAATATATCTGCAAGGTTTACCCTTCTTGTTTGGTAAATATTGAGAGGGATTACCTCTCAATTGACAAGCGATACCCACGACTCTTCATCTCTCCTGAATTTTCCAAGGCTGTTGTGAACTGGCCGAAGGAAAACCTTAAACTCTCTATGCATACTCCTGTCAGTTTTGAGcatgattttgttgaagaagaaagtgcTAGAGACTCATCCTGCAAGCTTTTGACGGTTCAACCTACAAGTTCAGAACAGAAAAATACAGTTTGGAATGCAAAAGTAATTTTGATGAATGGGCTTAGTAGGGGTGCATTGGAGGAGCTGTCATCAGATAAACTTCTTGATGACCGCATTCCTCATATTTGCAATTTCCTTAGATTTGCAATCCTTAAGAAGGATCATTCTTTCATGGCAGTTGGTGGTCCATGGGAACCTTCTGATGGTGGTGATCCATCTAATGATGATAACTCTTTGATCAGAGCAGCCCTTAGATACACAAAGGATATTATTCAGCTTGATTTGCAGAAGTGTCAACACTGGAACCGATTCCTTGAGATACATTATGATAGAATCGGTAAAGATGGTTTCTTCAGCCACAAGGAAATTACTGTACTTTATGTTCCTGATTTGTCTGACTGCCTTCCTTCATTGGATGAATGGCGTGATCAGTGGCTTGCCCACAAGAAAACAGTGGCTGAAAGAGAACGTCAAATTTCTCTAAAGAAAGAgAAATCAAGGGCTATCAAGGAATCAAATGacAAATCAGATAAGAGGAAGGATTCTGCTGCATCTGGAAAATCAGAtgttaagaaaaaggagaaagaTAATAGTACTGTTAAGGAAGAGAGTGAAAAAAAAGCTGTAGCGAGTAAAAAGACAGTTGCTAAAAATGATGCTGTAGACGTAGGTGAAGGCAAGAGTGCTGAGAAAAAGCCAGGGGAAGCTACCCCTGGTCAACCTGCAGGAAGTGTGAAGTCtgtgaagaagaaaattataaagaaGATTGTGAAAAAAGTTGTCAGTAAGACAAATGACAGTGCAAAGAAACAAATTGAGAAATCAGGTGAGAAGGATGTTGCAGACAAAGTGGCCACATCAGATGTTCCTGTTGATGAGGTCAAGTCTTCTGTGGATCCTATTGGGATTCAGACTTCTGGGGAAAACACAGTTGCGGCAGATATTCCTGTTGCGAAAACTGATGATGAAGGGAAAAACGACAAGGAAATAAAAAGTTTGGAAGGTAAGCCTCTGGACAAACTGGATCCAGCAGTTAATTTAGGTACCAAGGATGCTACTGTGAAAActattaaaaagaagaaaattatcaaGCGAGTACCTAAAAAGAAGGTGGTTGATGAGGCGTCTAAATCTGTATTAAATGAAGAGAATGTCGCAGCAGTTCCGGCAAAGGATGCTACTGACAGCACTGACAAGCAGACTGCTGATGCAGACACCATAGTGCCCGAGGGAAAGAAACCTGCAAAGGTAGTAGTAACTAAGAGAAAgttaaaaacaccaatctctGGGATGCAAGATGATGCAACTGATTCCAACAAAAAAGACACAAAGTCTGATAAAAAGGATGAAGAGAATGCTGTGGCAGCTCCTGCAAATGATGTTACACAGAGCACTGGCAAGCAGGCTACTGATGCAGACACAAAAACTACGCCGGtggcaaaaaagaaaattgtgaaGGTAGTTCCTAAGAAAAAGTTAAAGGTGCTGCCTACCTCTGAGAAGCCAGGAGGTGCAGGTGATTccaataaaaatgaaatgaagtCTGACAATGAAGACAAGAAGGATGGAAAAGAAACCGGAGAAAAAAGTGGATCCAAGATAGCTAAACAGAAAACCTCTGAGAAAGATACTCAAATTGTCAGGGGGAAACTGAAAGTTGGGGACAAATCAAAAGATGAGAAAGTAACAAAAGAGAAAGATGGAAAAGATGAGTCTAAAAGCAAATCTAGTAACGAAGTGAAAGAGAAGAGGAAGTCTGATGAACCTCCTCGGCACCCTGGTCTTATTCTAAAAACAAAATCGACAAAAGATTCTAAACTACGGTCATTGTCAATGTCTCTTGATTCATTGTTGGATTATACTGACAAAGATGTTGAAGAATCAACACTTGAGCTTTCATTGTTCGCCGAATCATTTTATGAAATGCTTCAGTTTCAAATGGGTAGTAGGATTTTGACTTTTCTTCAGAAACTGCGTGAAAAATTTGTGATCAAAAGAGCTCAGCGAAAGAGGCAGCGGGACAAGGATAGTGCAAACAAGACACCCACAAAACGTCAAAAGAGCCAAAAGGGTGATGACCCTTCTGTTAAGAGTGAGACAAAAGTGGACACATCAAATCCAACCCAAGCAGATAACGAGAAAACTGTTACCGAGAATGATAATACTAGTAATAAGGAGGAGGATGTGAAGATGGAAAATGCATCAGACGAGGAAGTAGAGCCGGAAGAAGAGGACCCTGAAGAGGATCCAGAAGAGGAAATGGAAAGTGATAGTCCCCAACACGACTCATCAAATGATAAAAACGATGAACAAGAGGGTGAAGCAAAAAATGAATCTGAAAATGTTACTAGCAATGAAAAAGCAGCAGATGAAACTTCTAAAGGGGAAATAAAGGTTAAAGATGAGGTGAAAGAGTCCAAAGACAATGTTCAACTCAATAATGAAAAGGAAAGCAAGGTTGATACAGTTAAGAAAGAAACCCCTGCTGTTAAGGAAGCTGTTGTGGACAAAGAATTGTTGAAGGCTTTTCGATTTTTTGATCGGAATCGTGTTGGCTACATTAGGGTTGAAGATATGAGAATAATAATCCACAATCTAGGGATGTTCCTTTCTCACAGGGATGTGAAGGAGCTTGTACAAAGTGCATTGTTGGAGAGCAACACCGGGAGGGACGATCGGATACTTTATATCAAGTTGGTGCGGATGAGTGATATTTGA 4296 0.4136 MYSSRGSGAYSQSYTGQSAYGQKLSANYSGASIGGHDATPHSAASRHSGILGSSQDADVGSYRAHNAVAQYGGQYSSVYGSAAMSTAQQTPSLSTKGTGSLALDARGGYSLGVSDSPKFASSDYLLASSTHGYGHKSDQLYGDKSLDYSGLDRRQYGERQSGYIGRDLSSDPTGRYATDPVGYNHQHQATLLRQEQLLKSGSLQAASLDGGTRQTDYLAARGVASRHPTQDLMSYGGRIDSEPHASSMLSATSYSGQHAPSILGAAPRRNVEDLLYSQNASNPGYGVSLPPGRDYASGKGIHGNAMDLDYPANLMSHGGSTDRKDDRTSYLRDFELREEERRRDRLRGRDRDRERDKERERLRERDRDREKEREKERMERREKERERDRKRALEVKLERTPVRSSKDPRNTSKVPRGSSLTKEAKSSRRDSPHRGASHRNRSPVKEKRREYICKVYPSCLVNIERDYLSIDKRYPRLFISPEFSKAVVNWPKENLKLSMHTPVSFEHDFVEEESARDSSCKLLTVQPTSSEQKNTVWNAKVILMNGLSRGALEELSSDKLLDDRIPHICNFLRFAILKKDHSFMAVGGPWEPSDGGDPSNDDNSLIRAALRYTKDIIQLDLQKCQHWNRFLEIHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDEWRDQWLAHKKTVAERERQISLKKEKSRAIKESNDKSDKRKDSAASGKSDVKKKEKDNSTVKEESEKKAVASKKTVAKNDAVDVGEGKSAEKKPGEATPGQPAGSVKSVKKKIIKKIVKKVVSKTNDSAKKQIEKSGEKDVADKVATSDVPVDEVKSSVDPIGIQTSGENTVAADIPVAKTDDEGKNDKEIKSLEGKPLDKLDPAVNLGTKDATVKTIKKKKIIKRVPKKKVVDEASKSVLNEENVAAVPAKDATDSTDKQTADADTIVPEGKKPAKVVVTKRKLKTPISGMQDDATDSNKKDTKSDKKDEENAVAAPANDVTQSTGKQATDADTKTTPVAKKKIVKVVPKKKLKVLPTSEKPGGAGDSNKNEMKSDNEDKKDGKETGEKSGSKIAKQKTSEKDTQIVRGKLKVGDKSKDEKVTKEKDGKDESKSKSSNEVKEKRKSDEPPRHPGLILKTKSTKDSKLRSLSMSLDSLLDYTDKDVEESTLELSLFAESFYEMLQFQMGSRILTFLQKLREKFVIKRAQRKRQRDKDSANKTPTKRQKSQKGDDPSVKSETKVDTSNPTQADNEKTVTENDNTSNKEEDVKMENASDEEVEPEEEDPEEDPEEEMESDSPQHDSSNDKNDEQEGEAKNESENVTSNEKAADETSKGEIKVKDEVKESKDNVQLNNEKESKVDTVKKETPAVKEAVVDKELLKAFRFFDRNRVGYIRVEDMRIIIHNLGMFLSHRDVKELVQSALLESNTGRDDRILYIKLVRMSDI 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01919 1431 PANTHER CCAR1 HOMOLOG 965 1430 - -
Tsu05g01919 1431 PANTHER CCAR1 HOMOLOG 1 809 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 1283 1341 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 31 56 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 1037 1131 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 682 758 - -
Tsu05g01919 1431 Coils Coil 355 393 - -
Tsu05g01919 1431 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 965 1430 IPR025224 GO:0006355
Tsu05g01919 1431 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 809 IPR025224 GO:0006355
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 1226 1243 - -
Tsu05g01919 1431 Pfam DBC1 567 684 IPR025954 -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 1192 1341 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 789 810 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 340 410 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 1244 1258 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 983 1001 - -
Tsu05g01919 1431 SMART DBC1_2 565 690 IPR025954 -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 961 980 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 682 776 - -
Tsu05g01919 1431 SUPERFAMILY EF-hand 1363 1408 IPR011992 -
Tsu05g01919 1431 Pfam BURAN domain 464 546 IPR045354 -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 1192 1225 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 911 1132 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 1259 1282 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 340 447 - -
Tsu05g01919 1431 MobiDBLite consensus disorder prediction 422 447 - -
Tsu05g01919 1431 Pfam LAIKA domain 1116 1181 IPR045353 -
Tsu05g01919 1431 ProSiteProfiles EF-hand calcium-binding domain profile. 1360 1395 IPR002048 GO:0005509
Tsu05g01919 1431 Gene3D - 1362 1427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01919 Tsu-Chr5 21202098 21210588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01919 392 702 EF-hand Containing Proteins AT2G03150 57.367 3.30e-116 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01919 K25827 - gmx:100784665 1741.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01919 05 21202098 21210588 Tsu05g01919 05 21202098 21210588 ECH