Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01909 ATGTCTAGCTTCACTCATGCAACTACACTACTCCATGTTCACATCAAAACCAACCACAAAAACACTTCAAACAACAACATTAACAACAACcctttattatcatcatcatcatcttcaaaaacaaatgcaaacactagaagaaatttaatttcaacaTTTCTAGCAACATCAATTATTGGAGTAAATGTTGCAACAACACCAATAGCACTAGCACAAAATTGGGGTACACGTTCTTTTCTTAAAGAACATTTTTTTGAGCCAGGTTTATCACCTGAAGATGCAGTTTTAAGGATAAAACAAACAGCTGAAGGGTTACATGATCTTAGAGAAATGTTGGAACATTTATCTTGGAGGTATGTTATGTTTTATATAAGATTGAAACAGAATTATCTTGAACAGGATTTGAAAAATGCTATCACTACTTTGCCTGAAAATCGTCGCAAGGAGTATGTTAAAACTGCTAATCAGTTGGTTGATAACTTGACTGAGATGGATCGTTATGTTCGGTCACCAAAGGTATATGAATCATACCTATACTACGAGAAGACATTGAAATCAATAGATGAACTTGTAGCTTTGTTAGCATAG 588 0.3078 MSSFTHATTLLHVHIKTNHKNTSNNNINNNPLLSSSSSSKTNANTRRNLISTFLATSIIGVNVATTPIALAQNWGTRSFLKEHFFEPGLSPEDAVLRIKQTAEGLHDLREMLEHLSWRYVMFYIRLKQNYLEQDLKNAITTLPENRRKEYVKTANQLVDNLTEMDRYVRSPKVYESYLYYEKTLKSIDELVALLA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01909 195 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 195 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Tsu05g01909 195 Gene3D - 55 194 IPR023222 -
Tsu05g01909 195 SUPERFAMILY Oxygen-evolving enhancer protein 3, 84 195 IPR023222 -
Tsu05g01909 195 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 71 195 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Tsu05g01909 195 MobiDBLite consensus disorder prediction 19 41 - -
Tsu05g01909 195 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01909 K08901 - gmx:100807480 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01909 05 21033924 21035215 Tsu05g01909 05 21033924 21035215 ECH