Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01904 ATGAATCCTCTTAACTCTCCCATTCTTGGTACAACAATATCATtgcattcattcaaattcaaagcTATTAACAAATACAACTACGAACACAATTACATTCACAATTCTTGTATTATGATGCACAAACGAGTTAACTCAGAAGCACCCAACAAACTCAGCACCACCACTGAGTTAGATGAGCACTCGCAGGGACCCATCACCAAACCATGCTTATGTGGAAGAAGACACTTCATTGAAGCTGCTGCAACTGCTACACTCACAACCACTCAGTTCCCTATTCAGCCTTCCACAGCCACAAATTCTGATTCTGATTACACAGCTTTGGTTAACAAGTTTCACCCACCTAAACCTGATTGGTATCAAAAGTTTTATGCTTGGGTTCTGAGTTCATTTACCAAATCCTATGAAGCTGAGGTTGCTCGGTACAAGTCTGAAATATtcaaaaacttaaaggacaagAAGGCTAACAAAATCTTGGAGATTGGCATTGGAACTGGTCCTAACCTCAGTTATTATGGTAGCAATCCTGATGTGCAGGTTATTGGCATTGATCCTAATCCGGAGATGGAGAAGTATGCTAGAGCTTCTGCTGCATCGGCTGGACTTCCACTctcaaattttgagtttataCATGCTGTCGGGGAGGTTATACCGTTGAGCGATAATTCAGTCGATGCAGTTGTTGGAACACTTGTATTGTGTTCCGTTAAAGATGTTGATATGACATTGCAAGAAGTGAGAAGGGTGCTCCGACCTGGTGGCATGTATCTGTTTGTAGAACATGTTGCTGCAAAAGATGGAACATTTCTCCGATTATTACAGAGAATTCTCGATCCTCTGCAACAGACACTTGCAGATGGATGTCATCTTTCTAGAGATACAGGAGACAGTATAACAAGAGCTGGATTTTCAAGTGTTGAGCTTGACATAGCATTCTTATCAAATGCTACATTTGTAAATCCTCATGCATATGGAATAGCTTACCAGTAG 990 0.3899 MNPLNSPILGTTISLHSFKFKAINKYNYEHNYIHNSCIMMHKRVNSEAPNKLSTTTELDEHSQGPITKPCLCGRRHFIEAAATATLTTTQFPIQPSTATNSDSDYTALVNKFHPPKPDWYQKFYAWVLSSFTKSYEAEVARYKSEIFKNLKDKKANKILEIGIGTGPNLSYYGSNPDVQVIGIDPNPEMEKYARASAASAGLPLSNFEFIHAVGEVIPLSDNSVDAVVGTLVLCSVKDVDMTLQEVRRVLRPGGMYLFVEHVAAKDGTFLRLLQRILDPLQQTLADGCHLSRDTGDSITRAGFSSVELDIAFLSNATFVNPHAYGIAYQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01904 329 PANTHER METHYLTRANSFERASE LIKE 7B 51 328 - -
Tsu05g01904 329 Pfam Methyltransferase domain 159 258 IPR013216 GO:0008168
Tsu05g01904 329 CDD AdoMet_MTases 157 264 - -
Tsu05g01904 329 Gene3D Vaccinia Virus protein VP39 116 315 IPR029063 -
Tsu05g01904 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 309 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01904 153 261 Acyl Lipid Metabolism Gene Families AT1G48600 30.000 1.82e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01904 - - mtr:MTR_5g041780 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01904 05 20959244 20962479 Tsu05g01904 05 20959244 20962479 ECH