Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01874 ATGGAGTCCAAAGGTTCAATTTTAATTAACCTtcttttgcttcttcaattaTCTGTTCTTTGTGCTTCACAAAACTCACAGGATTTCGATTTCTTCTACTTTGTTCAACAGTGGCCAGGATCATACTGTGATTCACAGAAGAGTTGTTGCTATCCAACAAGTGGAAAGCCTGCTGCAGATTTTGGAATTCATGGTTTATGGCCTAATTATAAGGATGGTTCATACCCATCTAACTGTGATCCTAGTAACTCTTTTAAACCATCTCAGATTTCTGATCTCACAAGTAGTTTGAAAAAGAATTGGCCCACACTAGCATGTCCAAGTGGTGATGGAATTGCTTTTTGGACCCATGAATGGGAGAAACATGGAACTTGCTCAGAATCAGTCCTTAATCAACATGACTATTTTGAAACAACTCTCAACTTAAGACAAAAAGCCAACCTCCTCAAAGCTCTTACTAGTGCAGGTAACTATCATTATAAAACTCACTTATAA 495 0.3636 MESKGSILINLLLLLQLSVLCASQNSQDFDFFYFVQQWPGSYCDSQKSCCYPTSGKPAADFGIHGLWPNYKDGSYPSNCDPSNSFKPSQISDLTSSLKKNWPTLACPSGDGIAFWTHEWEKHGTCSESVLNQHDYFETTLNLRQKANLLKALTSAGNYHYKTHL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01874 164 Pfam Ribonuclease T2 family 29 156 IPR001568 GO:0003723|GO:0033897
Tsu05g01874 164 PANTHER RIBONUCLEASE T2 8 156 IPR001568 GO:0003723|GO:0033897
Tsu05g01874 164 ProSitePatterns Ribonuclease T2 family histidine active site 2. 114 125 IPR033130 -
Tsu05g01874 164 ProSitePatterns Ribonuclease T2 family histidine active site 1. 61 68 IPR018188 GO:0003723|GO:0033897
Tsu05g01874 164 CDD RNase_T2_euk 29 156 IPR033697 -
Tsu05g01874 164 PANTHER BNAA02G26660D PROTEIN 8 156 - -
Tsu05g01874 164 SUPERFAMILY Ribonuclease Rh-like 26 158 IPR036430 GO:0003723|GO:0033897
Tsu05g01874 164 Gene3D - 23 163 IPR036430 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01874 Tsu-Chr5 20511552 20514186 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01874 K01166 - gmx:100782011 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01874 05 20511552 20514186 Tsu05g01874 05 20511552 20514186 ECH