Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01861 atgcTTAAGAAAAACCTTCACATTGGTTTCATCAATATGTTTGATTCTTTGAATGATTTTGTTCATGGAAACATGTCTTTGGCTTTAGATTCTTTGAGGGTTTTCATAAGAAATTATTTGTTCTATTCATTTGGATTGATCCTCAAATACTTCTTCAGGTTTCTTCATTTAGGAGATGCTAAAACAGATGTTATTAATTCACAATCACAAAAACAACTAGTTGATGGAAATTTTCATGATTCTAAGATTGATGGTTTTCCAGAAGAGTTAactaatttccttttttggAGTGAAGATTTTCATCAAGGAGAAACAGAGTGCTCTGTTTTCatggatcatcatgttcatgaAGAAAAAACAGAGTACTCTGTTTTGAAGAATATTCACTCTAATTTTCATGATGATTGTGTGAAAACAGAGGTTTATATGGATAACTCTGTTTCAAATGAGATTGAATCAGTTTTTTTGGATAGTgagtttgaaaattttgttgttCATGAATATGGTAAGGAAAATGGAGGAGAAAAAGAAGTGTTTGTTTCAAAAGAGAGTGAATCAAATTTTCGAGAAATTGAAAACAAGAATTTTGTTTCCATGGAGAATGGTTATTATCTATGTGATGATAGTATGAAGGTAgatgaagagaaagaagaagaaaaagaaatagaaggAGATGATATATTGGAGATTGAGTCCAATGTTCGAGAAGATGGATGCGAAATCGATGAAAATGAAACAGAGTACTCTGTTTTCATAGAGAATGATACAAATGAAGATGGCGAGAAAATAGTTGAAAAGGAAATAGAAGACTCTGTTTCTAAGGATAGTGAATCTAATCTTCGTGATGTTAGTATGAACaaagatgaaattgaaaaagAGAATTTTGTTTTTCGCGATGAAAGTTTCGATCTTCATGATAGTAAAAGAGCAGAGGAAACAGAGCAAGAAACAGGGGACTCTGTTTTTGTGGAGAGTGATAGTATCAAAACAATCACAAGTAAGTATGAATTCTTTGCAGAAAaagatataagttgttttgttgAAGAACCAACGGCATTGCGATTCAGTTTCCGAGAATTTTACGCGAGTCCAAATGTCTCATCGATTTCCAATAATGAATACAAAGAGTTTTCAAAGCTTGATTTAGAGAAAGACTTTGTAACtgaaaaacaagaagaaaaagatgagTCTATTCACTCAAATGATGTTCCATTTCGCTTTGAGAGCGAAATGTTTGGTGTAACTGATTCATCTGATGaagattatttcattttcaatgaAAATTCAGTTACATCTGATTCTGAATCAGAATCATCTTGCTCAAGTGGTTTAATATGGGGCAACAACACCAATAACAAAATTGATGATTCATTTTCCTATCGGTTTCTTGGTAGCGAAAAATTTGAGTCAGAGATTCGAAAGTTAATGATGAGagatgaaaaaatagaaggtctAGAAGAAAATCAATCTTCATTTGATGAtaaagtttcaaaatttgaggctgattttgaaaatgagtaTATTGAAATAGAACATGAAATGAAGGGTTTGAAATCCTTTGAAGAACATGGTTTTGAAGtgaaagataaaaaagaagttatgaAGAAAAGTGAAGAAGCTAAGTGGGAAGAGGAATTGAATGAatcagaatctgatgaagatgattttgaATGGGAGCATGAAGAAATAGTGGAACAATTGAAGTTAGAATTGAAGAATTCAAGACAAGGTGGACTTGCTACAATCATAGAagaagttgaagatgaagaagaacaagaTGAAAAAGAATCACCAAAAGTGTTTCAAGAATTCAAACCAATGAAAATTGAAGTGAAGTTAGTAGAACACAAGGATCAAATTAATGAGATTGATAAAGTTTACAAAAGCTATGCAGAGAAAATGAGGAAACTTGATATCTTGAATTATCAAACCATGCATGCATTAGGTCTACTTCAACTAAAAGACCCtcttaaattaatttcaataccAAAATCCACCATCTCAAATGCAATAATCTCTCAAAATTTGTGGCCAAGAAAATCAACAAAGATCACATCTGACCCATTTCTAAAACTTGTTCATCAACTTCATAGAGATTTGGAATTGGTATATGTTGGACAAATTTGTCTCTCATGGGAAATTCTATGTTGGCTACACCTGAAAGCCAATGAGTTACAACAATATGATTCAAAAGGGTCTCATAGGTATAATCATGTTGCTggtgaatttcaactttttcaaGTATTGATGCAAAGGTTCATAGAGAATGAGCCATTTCAAGGTGGACCAAGGATTCAAAATTATGTAAAGAATCGTTGTGTGATTAGAAACCTACTTCATGTTCCAGCTATAAAAGATGATAGTAAAGGTGGTGAGGAGGATCCTATTGCAAGTGGAAGATTGCAAGATATCATCAAGGAATCAATGCGGGTATTTTGGGAATTTGTCCGAGCAGATAATAAAGATAATGGGAATCTGATATCTAAGGAAATTGGAAGTGATCTTAAAGACCCTGTAATTTCAAATCTTCTAGTGGACATTCGAACACAACTATTGAAGAAGGAGAGAAAGCTAAAAGACATAGTGAGAAGTGGGAATTGCATAGTGAAAAAGTTCCAAAAGCACCATGAAGATCAACTTGATCATGAGCAACTGGTTGCTCAAGTTGGGTTGAAATTGATTTCAAGGGTGGTAAACATGTCACAATTAAGAAAAGAACAAGTACTATGGTGTAGTGAAAAGTTGAACCGAATCAAATTTTTAAGCAGGAAGATTGTCCATGTGGAAccttcttttttgctttttccaTGTTGA 2814 0.2914 MLKKNLHIGFINMFDSLNDFVHGNMSLALDSLRVFIRNYLFYSFGLILKYFFRFLHLGDAKTDVINSQSQKQLVDGNFHDSKIDGFPEELTNFLFWSEDFHQGETECSVFMDHHVHEEKTEYSVLKNIHSNFHDDCVKTEVYMDNSVSNEIESVFLDSEFENFVVHEYGKENGGEKEVFVSKESESNFREIENKNFVSMENGYYLCDDSMKVDEEKEEEKEIEGDDILEIESNVREDGCEIDENETEYSVFIENDTNEDGEKIVEKEIEDSVSKDSESNLRDVSMNKDEIEKENFVFRDESFDLHDSKRAEETEQETGDSVFVESDSIKTITSKYEFFAEKDISCFVEEPTALRFSFREFYASPNVSSISNNEYKEFSKLDLEKDFVTEKQEEKDESIHSNDVPFRFESEMFGVTDSSDEDYFIFNENSVTSDSESESSCSSGLIWGNNTNNKIDDSFSYRFLGSEKFESEIRKLMMRDEKIEGLEENQSSFDDKVSKFEADFENEYIEIEHEMKGLKSFEEHGFEVKDKKEVMKKSEEAKWEEELNESESDEDDFEWEHEEIVEQLKLELKNSRQGGLATIIEEVEDEEEQDEKESPKVFQEFKPMKIEVKLVEHKDQINEIDKVYKSYAEKMRKLDILNYQTMHALGLLQLKDPLKLISIPKSTISNAIISQNLWPRKSTKITSDPFLKLVHQLHRDLELVYVGQICLSWEILCWLHLKANELQQYDSKGSHRYNHVAGEFQLFQVLMQRFIENEPFQGGPRIQNYVKNRCVIRNLLHVPAIKDDSKGGEEDPIASGRLQDIIKESMRVFWEFVRADNKDNGNLISKEIGSDLKDPVISNLLVDIRTQLLKKERKLKDIVRSGNCIVKKFQKHHEDQLDHEQLVAQVGLKLISRVVNMSQLRKEQVLWCSEKLNRIKFLSRKIVHVEPSFLLFPC 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01861 937 Pfam Protein of unknown function (DUF1666) 698 936 IPR012870 -
Tsu05g01861 937 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 290 937 - -
Tsu05g01861 937 Coils Coil 273 293 - -
Tsu05g01861 937 PANTHER OS09G0413600 PROTEIN 15 278 - -
Tsu05g01861 937 PANTHER OS09G0413600 PROTEIN 290 937 - -
Tsu05g01861 937 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 15 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01861 Tsu-Chr5 20291035 20296446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01861 - - mtr:MTR_5g040600 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01861 05 20291035 20296446 Tsu05g01861 05 20291035 20296446 ECH