Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01846 ATGGCAAAACCAAGTTCAGCCGGTAGTAGAACAAGAAGCTTTGTGCATATTGTTATAGTAGTTGGTCTATGCTGTTTCTTCTACATATTAGGTGCGTGGCAAAGAAGTGGTTTTGGAAAGGGAGATAGCTTAGCATTGGAGATAACTAAGAAAAGTGTTGGCTGTGATATAGTTCCAAATTTAAGTTTTGACTCTCACCATGGTGGAGAAGTTAGTAAAATTGATGAGGTTGATTCAAAACCTAAGGTATTTAAACCTTGCAAGGCCCGATATATTGATTATACGCCCTGCCATGACCAACGGCGTGCCATGACATTTTCTAGAGAAAATATGATTTATCGAGAGAGACATTGCCCCCGTGAGGAAGAGAAGTTACACTGTTTGATACCAGCACCTAAAGGGTATGTAACTCCGTTTCCATGGCCAAAGAGTCGTGATTATGTTCCGTATGCAAATGCACCCTACAAGAGTCTTACCGTTGAGAAGGCTATTCAGAACTGGATCCAATATGAAGGGAATGTGTTTAGATTCCCTGGTGGTGGAACCCAATTCCCTCAAGGGGCTGACAAGTATATTGACCAAATTGCTTCTGTGATACCAATAGAGAATGGAACAGTCAGGACAGCACTGGACACTGGTTGTGGGGTTGCCAGTTGGGGTGCATATCTTTGGAGCAGAAATGTTATTGCCATGTCATTTGCACCGAGGGACTCTCATGAAGCACAAGTACAATTTGCACTTGAAAGGGGTGTACCTGCTGTCATTGGTGTCCTGGGAACAATAAGATTGCCTTATCCATCTGCAGCCTTTGACATGGCACATTGTTCTCGTTGCTTAATTCCTTGGGGATCAAATGGTGGAATTTATATGATGGAAGTTGACCGAGTTCTAAGACCTGGTGGTTATTGGGTGCTTTCGGGACCTCCAATCCATTGGAAGGTTAATTACAAAGCCTGGCAAAGACCTAAGGAGGATCTTGAGGAAGAACAAAGAAAGATTGAAGAGGTAGCTAAGCTCCTTTGCTGGGAGAAGAAGTCCGAGAAACATGAAATTGCCATCTGGCAAAAAACGGTTGACACTGAAACATGTCGAAGCAGACAAGAAGATTCTGGTGCAAAATTCTGTGAATCAACAGATGCTGATGATGTTTGGTATAAGAAAATGGAGGCATGTGTTACTCCTAATTCTAAAGTATCCGGTGATCTTAAGCCTTTTCCACAGAGACTATATGCGGTTCCTCCTAAAATTGCCAGTGGTTCTGTTCCTGGAGTTTCAGTCGAGACATACCAGGATGACAACAAAAAGTGGAAAAAACATGTTAGTGcttacaagaaaataaatagactTCTGGATTCCGGAAGGTATCGCAATATCATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCTGCTATTCAGTCTCCTAAGTTATGGGTCATGAATGTCGTGCCTACCATAGCACAGAAACATACACTGGGTGCCATATATCAGCGAGGACTTATAGGCATTTATCACGATTGGTGTGAAGCTTTCTCTACATATCCGAGGACATACGACCTCATTCATAGCAATGGTCTCTTTAGTCTGTACAAGGACAAATGTAACATAGAAGACATTCTTCTGGAGATGGACCGGATTTTACGACCAGAAGGTGCTGTGATATTCCGCGATGAAGTCGATGTCTTAATCAAGGTAAAGAAAATTGTTGGAGGAATGAGATGGGATACTAAATTGGTTGACCATGAAGATGGTCCACTTGTTCCTGAAAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCTGATACAAATGCTACATCAACACAGTAA 1830 0.418 MAKPSSAGSRTRSFVHIVIVVGLCCFFYILGAWQRSGFGKGDSLALEITKKSVGCDIVPNLSFDSHHGGEVSKIDEVDSKPKVFKPCKARYIDYTPCHDQRRAMTFSRENMIYRERHCPREEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQIASVIPIENGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIRLPYPSAAFDMAHCSRCLIPWGSNGGIYMMEVDRVLRPGGYWVLSGPPIHWKVNYKAWQRPKEDLEEEQRKIEEVAKLLCWEKKSEKHEIAIWQKTVDTETCRSRQEDSGAKFCESTDADDVWYKKMEACVTPNSKVSGDLKPFPQRLYAVPPKIASGSVPGVSVETYQDDNKKWKKHVSAYKKINRLLDSGRYRNIMDMNAGLGSFAAAIQSPKLWVMNVVPTIAQKHTLGAIYQRGLIGIYHDWCEAFSTYPRTYDLIHSNGLFSLYKDKCNIEDILLEMDRILRPEGAVIFRDEVDVLIKVKKIVGGMRWDTKLVDHEDGPLVPEKILIAVKQYWVADTNATSTQ 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01846 609 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 605 IPR004159 GO:0008168
Tsu05g01846 609 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 605 - -
Tsu05g01846 609 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 596 IPR004159 GO:0008168
Tsu05g01846 609 Gene3D Vaccinia Virus protein VP39 159 368 IPR029063 -
Tsu05g01846 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 558 IPR029063 -
Tsu05g01846 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 308 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01846 Tsu-Chr5 20123446 20132496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01846 - - gmx:100778611 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01846 05 20123446 20132496 Tsu05g01846 05 20123446 20132496 ECH