Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01842 ATGGATTTGGAGATTTCTGATGAGATGTTAGGGACTTTTGCTCCACTTTTAGTTTATTGGATTTATTCTggtttttatgttgttttgggGTTCTTTGCTGAAGATTATAGGTTACATACAAAACAAGATGAGGATGAAAAGAATTTGGTTTCTAAGTTTGATGTTGTTAAAGGAGTTCTCCTTCAACAAGCAGTTCAAGCTGTGGTTGCAACTCTCTTGTTTGCAGTGACAGGAAGTGATGATAGCCAAAATAGTACTGATGAGAATGCTTCTATCCTTGTTTTAGCAAGACAATTTATTACTGCTATGTTGGTAATGGACACATGGCAATACTTTATGCACAGATACATGCATCAAAATAAGTTCCTATACAAACACATCCACTCTCTACATCACAGACTCATCGTTCCTTATTCATTTGGAGCTCTGTACAATCATCCCATCGAGGGTCTTCTTAATGACACCATCGGTGGAGCTTTATCTTTCCTCCTCTCTGGTATGAGCCCTCGAGCatcaatcttcttcttctcctttgcGACCATTAAAACCGTGGACGACCACTGTGGGTTATGGCTACCTGGAAACCTGTTCCATATGTTTTTCAGTAACAATTCTGCTTACCACGACGTACACCATCAACTCTATGGTAACAAGTACAACTTCTCACAACCGTTCTTTGTTATGTGGGACAAAATCTTGGGCACCTACATGCCATACTCATTGGAGAAGAGGCCAAGTGGTGGTTTTGAATCTAGACCTTGTAAAGATTACAAGGATGAATGA 783 0.3755 MDLEISDEMLGTFAPLLVYWIYSGFYVVLGFFAEDYRLHTKQDEDEKNLVSKFDVVKGVLLQQAVQAVVATLLFAVTGSDDSQNSTDENASILVLARQFITAMLVMDTWQYFMHRYMHQNKFLYKHIHSLHHRLIVPYSFGALYNHPIEGLLNDTIGGALSFLLSGMSPRASIFFFSFATIKTVDDHCGLWLPGNLFHMFFSNNSAYHDVHHQLYGNKYNFSQPFFVMWDKILGTYMPYSLEKRPSGGFESRPCKDYKDE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01842 260 Pfam Fatty acid hydroxylase 100 235 IPR006694 GO:0005506|GO:0008610|GO:0016491
Tsu05g01842 260 PANTHER SPHINGANINE C4-MONOOXYGENASE 2 3 254 - -
Tsu05g01842 260 PANTHER STEROL DESATURASE 3 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01842 Tsu-Chr5 20036758 20039715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01842 1 260 Acyl Lipid Metabolism Gene Families AT1G69640 77.308 1.45e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01842 K04713 - gmx:100778076 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01842 05 20036758 20039715 Tsu05g01842 05 20036758 20039715 ECH