Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01819 ATGATGAGTGTTATTAGGAGAAGACTAGGAGCATGGGGGAATAAATATGTTAGTCTGGGAGGACGAATTGTGTTAATCAATGCGGTGTTGAGCGCCATCCCAATCTTTTACTTATCTTATATGAAGATGCCGACGAAAGTTTGGAGGGAGGTGGTGAAGGTTCAGAGGAAATTCCTTTGGGGAGGTTTAtcgaagaaaaacaaaatttgttgggTAAAATGGGATGatatttgtaaattaaaaaaggaGGGTGGTTTAGGTATTAGGGATCTCCGTCTAGTGAATATTAGTCTCTTGACTAAATGGAGATGGAAATTGTTGTCACAAGAGAATGCGGTGTGGAAAGAGGTAGTAGCTGCGAAATATGGTGGTGATGTTATTGGTATGGCGAATCCTGGTCAAGAGAGAGTTGTACGATTGGCCTCCAGATGGTGGGAGGATATTTGCAATTTGGATAGAGGTTATGGCTGGTTTACTTCAGCAATTGTCAAGAGAGTTGGTAGCGGAAGATTCACGGATTTTTGGACTGATGTTTGGATGGGACACCAAGCTCTCTGTGTTAGATTCCCGCGGCTGTATAGTATTTCGACTCAGAAGGCGAGCTCGGTTATTAATATGGGAAGGTGGGAAGGAAACCTCTGGCGTTGGGAATTTCAGTGGAGAAGGAGTTTTTTTGATTGGGAGGAGCAACTATTTTTGCAATTGTTGCAGGCAATGGATATGTTTCAGCCATCACAGGAGGAGGATAGGTGGCAGTGGCGGGCGAATATTGAGGAGGGATTTTCTGTCAAGTCTTGTTACGAGTTGTTGTGTGCTAATTTCAGTGTAGTAATGACTACAGAGCCTCTTGAcgaatttgttttttcaaatgTCTGGAAGTGTGCTGCTCCCTCAAAAGTCTGTGCGTTTTCTTGGCAGTTTTACCGAATACACCgcactcttcttcttcttcttcattcgGTTCCCACTTCCTACCATTACAGTGCAAAAATGTCACAAAATATTGTTCATGAGCGCCCTTTGTTTGGGGGAAAATTATCAATCATGTTCCCTAACAGGTTCCAGGATGTCAGTAATATTCGAGAAGTCCCGGATCATCAGGAGGTGTTTGCGGATCCTAGCCGTGATGAAAGCTTGATAGTTGAGCTTTTAGAGTATAAACCTGATATTGCTGATAATGGAAGTgctgcatggtttcttcaagaccTTGCTAATGAGCAGGATGCTGAAGGAACTGTGGTATGTTATTGTTTTGGTTTCTTCAAAGTTAATGCGAAATTCGATATTGCAATTGTTATATAG 1302 0.3917 MMSVIRRRLGAWGNKYVSLGGRIVLINAVLSAIPIFYLSYMKMPTKVWREVVKVQRKFLWGGLSKKNKICWVKWDDICKLKKEGGLGIRDLRLVNISLLTKWRWKLLSQENAVWKEVVAAKYGGDVIGMANPGQERVVRLASRWWEDICNLDRGYGWFTSAIVKRVGSGRFTDFWTDVWMGHQALCVRFPRLYSISTQKASSVINMGRWEGNLWRWEFQWRRSFFDWEEQLFLQLLQAMDMFQPSQEEDRWQWRANIEEGFSVKSCYELLCANFSVVMTTEPLDEFVFSNVWKCAAPSKVCAFSWQFYRIHRTLLLLLHSVPTSYHYSAKMSQNIVHERPLFGGKLSIMFPNRFQDVSNIREVPDHQEVFADPSRDESLIVELLEYKPDIADNGSAAWFLQDLANEQDAEGTVVCYCFGFFKVNAKFDIAIVI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01819 433 PANTHER BNAA07G24140D PROTEIN 332 411 - -
Tsu05g01819 433 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 335 418 - -
Tsu05g01819 433 PANTHER RAN GUANINE NUCLEOTIDE RELEASE FACTOR 332 411 IPR007681 -
Tsu05g01819 433 SUPERFAMILY Mog1p/PsbP-like 337 416 IPR016123 -
Tsu05g01819 433 Pfam Ran-interacting Mog1 protein 339 411 IPR007681 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01819 Tsu-Chr5 19724329 19729700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01819 - - mtr:MTR_1g026690 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01819 05 19724329 19729700 Tsu05g01819 05 19724329 19729700 ECH