Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01756 ATGGCGCATGCACAAGAGGTCAGATCAAGCCCGCTTTCGAAATGTGACACCTACTTCCAAACCATACAATCCAGAAAGAAACTACCACAGACATTGCAGGAAACATTGACAGATTCCTTTGCAAAGATTCCTGTTTCTTCTTTTCCAGGAGTTCCAGGAGGAAAAGTGATTGAAATTCTAGCAGACACACCTGTTGGCGAAGCTGTTAAGATTCTATCCGAAAGCAACATCTTAGCAGCTCCAGTTAAAGACCCTAATGCAGGAATTGGTTCAGATTGGAGAGACAGGTACCTTGGTATCATAGACTATTCGGCTATCATTCTCTGGGTGATGGAGAGTGCAGAACTTGCTGCAGTTGCTCTATCAGCTGGTACAGCAACAGCGGCTGGAGTTGGCGCGGGTACTGTTGGTGCTTTGGGAGCAATAGCATTAGGAGTTACAGGTCCTGCTGCAATTGCTGGACTAACTGCTGCTGCAGTAGGTGCAGCAGTGGCAGGTGGTGTTGCTGCAGATAAAACCATGGCTAAAGATGCTCCTCAAGCCGCAAATAACCTCGGTGAGGACTTTTACAAAGTAATACTTCAAGAAGAACCCTTCAAGTCAACAACGGTGCGATCAATACTTAAATCATATCGATGGGCACCGTTTGTTCCAGTTTCAAAAGATAGTGCTATGTTGACTGTCTTATTGCTGCTTTCGAAATATAGACTGAGGAATGTACCGGTGATAGAACCCGGTAAACCAGACATTGTAAACTTCATTACTCAGTCTGCAGTTGTTCAAGGTCTTGAGGGATGCAGAGGAAGAGATTGGTTCGACTGCATTGCAGCCAGGCCTATATCTGATCTGGGACTTCCTTTTATGTCTGCTGATAAGGTAATTAGCATCCAGAACAACGAATTGATTCTTGAAGCTTTCAAGATTATGAGGGATAACCAAATTGGCGGTCTTCCTGTAGTAGAGGGGCCAACAAAGAGAATTGTTGGAAACTTGAGCATAAGAGACATCAGATACTTGCTGCTAAAACCTGAACTTTTCTCCAATTTCAGGAATCTCACTGTGATGGATTTCATGAAGAAAATTGTCTCAGCATCCTATGAATCTGGAAAAGTTACTCGGCCTATAACATGCAAGCCTGACTCAACTCTAGATAGCGTGATTCACACTCTTGCTTCACAGTCTATTCACAGGATTTATACAGTAGATGGACAAGATCAAGTAGTTGGTGTCATCACACTGAGAGATGTAATCTCGTGTTTCATCAACGAACCTGATTACCATTTCGACGATTACTATGGATTTGCAGTTAAAGAGATGTTGAATCACTGA 1329 0.4327 MAHAQEVRSSPLSKCDTYFQTIQSRKKLPQTLQETLTDSFAKIPVSSFPGVPGGKVIEILADTPVGEAVKILSESNILAAPVKDPNAGIGSDWRDRYLGIIDYSAIILWVMESAELAAVALSAGTATAAGVGAGTVGALGAIALGVTGPAAIAGLTAAAVGAAVAGGVAADKTMAKDAPQAANNLGEDFYKVILQEEPFKSTTVRSILKSYRWAPFVPVSKDSAMLTVLLLLSKYRLRNVPVIEPGKPDIVNFITQSAVVQGLEGCRGRDWFDCIAARPISDLGLPFMSADKVISIQNNELILEAFKIMRDNQIGGLPVVEGPTKRIVGNLSIRDIRYLLLKPELFSNFRNLTVMDFMKKIVSASYESGKVTRPITCKPDSTLDSVIHTLASQSIHRIYTVDGQDQVVGVITLRDVISCFINEPDYHFDDYYGFAVKEMLNH 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01756 442 Pfam CBS domain 372 418 IPR000644 -
Tsu05g01756 442 Pfam CBS domain 291 341 IPR000644 -
Tsu05g01756 442 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 10 441 - -
Tsu05g01756 442 Gene3D - 51 266 IPR046342 -
Tsu05g01756 442 CDD CBS_pair_SF 291 417 - -
Tsu05g01756 442 PANTHER BNAANNG38820D PROTEIN 10 441 - -
Tsu05g01756 442 SUPERFAMILY CBS-domain pair 36 261 IPR046342 -
Tsu05g01756 442 ProSiteProfiles CBS domain profile. 370 426 IPR000644 -
Tsu05g01756 442 ProSiteProfiles CBS domain profile. 288 347 IPR000644 -
Tsu05g01756 442 CDD CBS_pair_SF 55 112 - -
Tsu05g01756 442 SUPERFAMILY CBS-domain pair 276 429 IPR046342 -
Tsu05g01756 442 SMART cbs_1 215 264 IPR000644 -
Tsu05g01756 442 SMART cbs_1 55 111 IPR000644 -
Tsu05g01756 442 SMART cbs_1 373 421 IPR000644 -
Tsu05g01756 442 SMART cbs_1 292 341 IPR000644 -
Tsu05g01756 442 Gene3D - 275 423 IPR046342 -
Tsu05g01756 442 ProSiteProfiles CBS domain profile. 50 116 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01756 Tsu-Chr5 18166246 18168877 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01756 - - gmx:100800376 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01756 05 18166246 18168877 Tsu05g01756 05 18166246 18168877 ECH