Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01737 ATGGCGTTCAAGATCAAGAACCCACATTCTTTCTTCCATCACCACCACTtcatatcaacaacaacaatcatcttcttaatcatcatcataatcatcttTAACAATTCCCATCAAACCACAGCTTCAACACTCatcacacaacaacaacaacaaccaaaccTCATAACAAATAGTAACACATTGGGTCATTGGGTTCAGCTAAAAAAATCCATAGGTATCTCAGCCATGCACATTCAAGTAATGAAAGACAACAAAGTCGTAATGTTCGATCGAACCGATTTCGGCCCATCAAACATTTCCTTACCAAACCACCGCTGCCGTTACATGTCATCAATTCTCGACTGCACTGCTCACTCAGTTCTCtacgacatttcatcaaacaccttACGTCCATTAACTCTTCACACTGACGCTTTTTGTTCTTCCGGCGCCGTTTCTCCCACCGGAACGCTAATTCAAACCGGAGGATACTTAGACGGTTACAGAAAACTCAGAACATTCACTCCATGCCCGAAAACCAACAACTGTGATTGGGAAGAACTTCCTCGGAATCTCTCTGCAAGTCGTTGGTATGCTTCGAATCAGATTCTTCCAGACGGAAGAATCATCGTCGTCGGTGGTCGTTCTGCATTTTCATACGAATTTGTTCCGAAGAATTTTAACGATGCTTCAATTTACTTTTTTCGATTCTTGCAAATTACGCGTGATTCAAATCCTGGTGAAGAGAACAATCTTTACCCTTTCTTGCATCTTTTACCCGACGGAAATCTCTTCGTTTTCGCTAATCGGCGTTcgattttgtttgattataaTCGGAACAGAGTAATCAGAGAATTTCCGATCATTCCCGGAGAAGAAAAGAGGAATTATCCGAGTACTGGTTCATCCGTTATGTTGCCGTTGAATTTGACCGGAAAAAACTCGACGTCGTTGATTGAGGTTGAAATTATGATTTGCGGCGGCGCGTATCCCGGCGCGTATGATTTTGCTAATAAAAAGAAAGTGTTTCTAGAAGCTTCTAGTAGTTGTGGGAGGTTGAAGGTTAGTGATTCTGAACCGGAGTGGGTTATGGAAGTTATGCCGATTCCACGTGTCATGCCGGATATGATTTTGTTACCGACAGGGAATTTGGTTATTTTGAATGGTGCCGCAAATGGTACTGCCGGTTGGGAAAATGCAGCGAACCCGGTCTTGTATCCGGTTTTATATCAACCCGATTTGCCCGATCCATTTTTGAGATTTCAGTTGTTAGCTCCAGCGAGTACTCCGAGGTTGTATCATTCTTCAGCTGTTTTGTTGCCAGATGGGAGGATTTTAGTGGGCGGAAGTAATCCGCATAAGCTTTATGATTTTCAGGCGACGTATCCAACCGACTTAAGTTTGGATGCGTATTACCCGGATTATCTTGGGCCGGAGTTGGTTGGATTGCGGCCCAAGATTATTGCGGTGGAGGTTGTTAATAATACGGCGTCATATGGGAATTTGTTTTCGGTATCCTTTTCTTTAATGAAGGTGAGAGACTTTAATGGGATTAGTATTTCGATGGTGGCACCTTCATTTACTACTCACTCGTTCGCGATGAATCAAAGGGTCTTGTTTTTAGAAATTACCTCAATGGAGGTGGTTGCGGTTGTTCAAAATTTAGGTGAGTTTGGTCTCGAAAACTCATCCGGAGAAGTTTCGAGTTCAATTTATAAAGCTACGGTGCATGGGCCCCCTTCTTTTAATGTGGCCCCACCTGGGTACTATATGCTTTATGTTGTCCATACTGGAGTTCCTAGTGTTGCTACTTGGGTTCATGTTAATTGA 1809 0.4057 MAFKIKNPHSFFHHHHFISTTTIIFLIIIIIIFNNSHQTTASTLITQQQQQPNLITNSNTLGHWVQLKKSIGISAMHIQVMKDNKVVMFDRTDFGPSNISLPNHRCRYMSSILDCTAHSVLYDISSNTLRPLTLHTDAFCSSGAVSPTGTLIQTGGYLDGYRKLRTFTPCPKTNNCDWEELPRNLSASRWYASNQILPDGRIIVVGGRSAFSYEFVPKNFNDASIYFFRFLQITRDSNPGEENNLYPFLHLLPDGNLFVFANRRSILFDYNRNRVIREFPIIPGEEKRNYPSTGSSVMLPLNLTGKNSTSLIEVEIMICGGAYPGAYDFANKKKVFLEASSSCGRLKVSDSEPEWVMEVMPIPRVMPDMILLPTGNLVILNGAANGTAGWENAANPVLYPVLYQPDLPDPFLRFQLLAPASTPRLYHSSAVLLPDGRILVGGSNPHKLYDFQATYPTDLSLDAYYPDYLGPELVGLRPKIIAVEVVNNTASYGNLFSVSFSLMKVRDFNGISISMVAPSFTTHSFAMNQRVLFLEITSMEVVAVVQNLGEFGLENSSGEVSSSIYKATVHGPPSFNVAPPGYYMLYVVHTGVPSVATWVHVN 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01737 602 Pfam Galactose oxidase-like, Early set domain 477 601 IPR015202 -
Tsu05g01737 602 Pfam Glyoxal oxidase N-terminus 76 321 IPR009880 -
Tsu05g01737 602 SUPERFAMILY Galactose oxidase, central domain 119 469 IPR011043 -
Tsu05g01737 602 SUPERFAMILY E set domains 476 601 IPR014756 -
Tsu05g01737 602 Gene3D - 58 472 IPR037293 -
Tsu05g01737 602 Gene3D Immunoglobulins 476 602 IPR013783 -
Tsu05g01737 602 PANTHER SECRETED PROTEIN-RELATED 24 601 - -
Tsu05g01737 602 CDD E_set_GO_C 475 601 IPR015202 -
Tsu05g01737 602 PANTHER F14L17.20 PROTEIN 24 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01737 Tsu-Chr5 17995406 17997466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01737 - - mtr:MTR_5g038410 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01737 05 17995406 17997466 Tsu05g01737 05 17995406 17997466 ECH