Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01736 ATGGTGATGGAAGTAGAAGTAGCACAAATGACAATATGGGAAGGCTATGTTGATTGGAGGAACAAGCCTGCTCTTAGAGGTCACCATGGAGGCATGCTTGCAGCTTCTTTCGTTCTTGTTGTGGAGATATTGGAGAATCTAGCTTATTTGGCTAATGCAAGCAATTTGGTTTTATATCTCAAAGAATATATGCATATGTCTCCTTCTAAATCAGCTAACAATGTCACAAATTTTATGGGAACATCATTTCTTCTTGCTCTTCTTGGTGGTTTCTTGTCGGATGCATTTTTCACTACTTATCATGTTTACTTGATAAGTGCAGTTATTGAGCTCATAGGTCTAATTGTACTCACAATACAAGCTCATTCACCATCACTAAAACCAACAAAATGCAATGGATCAATTCCATGTGATGAAGTTAATGGTGGAAAAAAAGCAATGTTATTTGCTGGTCTCTATCTTGTAGCTCTTGGAGTTGGAGGAATTAAAGGATCGCTTCCGGTTCACGGCGGTGAGCAATTCGACGAATCAACCCCAAATGGAAGGAAGCAAAGATCAACATTCTTCAACTACTTTGTGTTCTGTTTGTCTTGTGGTGCTCTTATTGCAGTTACTTTTGTTGTTTGGGTTGAAGATAATAAAGGTTGGGAATGGGGTTTTGCAATATCTACAATTAGtatctttttgtctattcctGTGTTCTTGGCTGGTTCAACTACTTACAGGAATAAGCTCCCTTCTGGAAGTCCACTTACAACCATTTTAAAGGTACTTGTTGCTGCATCACTAAGCACATGCACAAACAAAAACTCAAGCAATGCAGTTGTAAACATGTCATCAAGCCCTTCAAATTCTaacacacaaacaaaacaatcagagcaagaacaaacaacaaaacCAACCACATCATCTCAAACACCAACAGAATCCTTAAAATTCCTCAACAAAGCAATCACAAACAAACCAATCCATTCATCACTACAATGCACAATCCAACAACTAGAAGATGTCAAGGTAATCTTCAAAATTCTCCCGATTTTCGCCTGCACGATAATGCTCAATGCTTGCTTAGCTCAACTCTCCACATTCTCGGTCGAACAAGCCGCAACAATGAACACAACCCTTTTCTCCTCCTTCAAAGTTCCTCCGGCTTCATTACCGGTTTTCCCGGTACTCTTTCTAATAATCCTAGCTCCAATTTATGATCACATTATAATCCCTTATGCaagaaaagttaaaaaatcagaaacagGAATAACTCATCTCCAAAGAATCGGAATCGGATTAATACTCTCAATAATCGCAATGGCAGTGGCCGCAATCGTCGAAATCAAAAGACGAAAAGTAGCTTCACATTCAACTGCAACAAAAAATCCATTACCTATTTCATTTCTTTGGATAGCTTTTCAATATTTGTTTCTTGGTTCAGCTGATCTTTTCACTTTAGCTGGATTATTGGAATTTTTCTTCTCAGAAGCACCTTCAAGTATGAGATCATTAGCAACATCACTTTCTTGGGCTTCTTTGGCAATGGGATATTATCTTAGTTCAGTGATTGTTTCTCTAGTGAATAGTGTTACTGGTAATGGTAATCATAAATCATGGTTAAGTGGGTCTAACCTTGATAATTACCATTTGGAGAGATTCTATTGGTTAATGTGTGTGCTTAGTGGGTTGAACTTTCTTCATTATATGTATTGGGCTGCTAAGTACAAATATAGAGGGAGAGGGAGTGCTAATGAATGA 1746 0.3643 MVMEVEVAQMTIWEGYVDWRNKPALRGHHGGMLAASFVLVVEILENLAYLANASNLVLYLKEYMHMSPSKSANNVTNFMGTSFLLALLGGFLSDAFFTTYHVYLISAVIELIGLIVLTIQAHSPSLKPTKCNGSIPCDEVNGGKKAMLFAGLYLVALGVGGIKGSLPVHGGEQFDESTPNGRKQRSTFFNYFVFCLSCGALIAVTFVVWVEDNKGWEWGFAISTISIFLSIPVFLAGSTTYRNKLPSGSPLTTILKVLVAASLSTCTNKNSSNAVVNMSSSPSNSNTQTKQSEQEQTTKPTTSSQTPTESLKFLNKAITNKPIHSSLQCTIQQLEDVKVIFKILPIFACTIMLNACLAQLSTFSVEQAATMNTTLFSSFKVPPASLPVFPVLFLIILAPIYDHIIIPYARKVKKSETGITHLQRIGIGLILSIIAMAVAAIVEIKRRKVASHSTATKNPLPISFLWIAFQYLFLGSADLFTLAGLLEFFFSEAPSSMRSLATSLSWASLAMGYYLSSVIVSLVNSVTGNGNHKSWLSGSNLDNYHLERFYWLMCVLSGLNFLHYMYWAAKYKYRGRGSANE 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01736 581 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 576 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu05g01736 581 CDD MFS_NPF4 32 568 - -
Tsu05g01736 581 Gene3D MFS general substrate transporter like domains 4 579 IPR036259 -
Tsu05g01736 581 MobiDBLite consensus disorder prediction 273 308 - -
Tsu05g01736 581 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6-LIKE 15 576 - -
Tsu05g01736 581 SUPERFAMILY MFS general substrate transporter 50 569 IPR036259 -
Tsu05g01736 581 Pfam POT family 103 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01736 Tsu-Chr5 17985245 17993625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01736 3 578 Organic Solute Cotransporters AT1G69850 70.478 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01736 - - lja:Lj2g3v1339020.1 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01736 05 17985245 17993625 Tsu05g01736 05 17985245 17993625 ECH