Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01718 ATGGGAGCCAATTCATCCAATATGGAGTATGTTCATCATACATCAACAAAgtcaccaccaccatcatctCACACTCTCTCCTTCCATTCCACTGCTAAGTGGAAGGCTCACTTTGATGCCTCCAAAGAAATTAACAAGCTGATGGTGATTGAATTTACGGCTACATGGTGTGGACCTTGCAAATATATGGATCCAATCATCCAAGACTTTGCTGCAAAATACATTAAAGTTGATTTCATCAAGATTGACGTGGATGAATTAATGGGTGTCACTCAAGAATTCCAGGTGCAAGCAATGCCAACATTCATATTGATGAAGAAAGGTAAAGTTGTTGACAAGGTTGTAGGAGCAAAAAAGGAAGAGCTTGAAAAGCTAGTTGAGAAGCATCAAAACTGA 396 0.3712 MGANSSNMEYVHHTSTKSPPPSSHTLSFHSTAKWKAHFDASKEINKLMVIEFTATWCGPCKYMDPIIQDFAAKYIKVDFIKIDVDELMGVTQEFQVQAMPTFILMKKGKVVDKVVGAKKEELEKLVEKHQN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01718 131 MobiDBLite consensus disorder prediction 1 24 - -
Tsu05g01718 131 CDD TRX_family 36 105 - -
Tsu05g01718 131 Pfam Thioredoxin 38 127 IPR013766 -
Tsu05g01718 131 Gene3D Glutaredoxin 5 131 - -
Tsu05g01718 131 ProSitePatterns Thioredoxin family active site. 49 67 IPR017937 -
Tsu05g01718 131 PANTHER THIOREDOXIN 1 131 - -
Tsu05g01718 131 ProSiteProfiles Thioredoxin domain profile. 12 131 IPR013766 -
Tsu05g01718 131 PANTHER THIOREDOXIN 1 131 - -
Tsu05g01718 131 SUPERFAMILY Thioredoxin-like 34 129 IPR036249 -
Tsu05g01718 131 PRINTS Thioredoxin family signature 48 56 - -
Tsu05g01718 131 PRINTS Thioredoxin family signature 56 65 - -
Tsu05g01718 131 PRINTS Thioredoxin family signature 95 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01718 Tsu-Chr5 17727620 17728851 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01718 K03671 - gmx:100820138 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01718 05 17727620 17728851 Tsu05g01718 05 17727620 17728851 ECH