Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01697 atggaagaagaagaaggaaggatCAAATTAGACGGTTGTGGGTACGATGTCAAAACTTCTTCTCAACTCTGCATTTCAGCCATCAACTCCTACTACCATCAGGTTCTCAACTATGGTAGAAAGAGATGTGTGATTCTGGAAGCAGTGGTCCATGATAACAACTGTGTGTTAGCCAACACCTTAGCAGCTCATTATGTTTACTCCTCTGATTCTTCTCGAGCTACCTCTTTACTTCATTCCGCTAAATCCCACCTTGAACATGCAACCTTGTACGAGAAACTAGTTTTCGATGCCATCAGTTATTTGATGTCCCAAGATAGAGATGACGATGTAGCTATTGAGTTGCATTCTAAGCTTCTAATGCAGTTCCCGAGAGATTTGGTTTCTCTAAAGCGAGCACAAATCTTGTGCTTCTACATGGGCCGGCCTGATCTGTCTTTATCCCTCGTTAACCAGGTTCTACCTCAAAACGAAGAAGAAAATTACATATATGGCATGCTTGCTTTTCCTTTGTTGGAGCTTGGACGAATGAAAGACGCCGAGGAGGCTGCCAAAAGAGGATTTGAAATCAACAAGCACGACGGGTGGTCACAGCATGCTTTGTGCCATGTACTTCAGTACGAGTGCCGTTTTAGAGAAGCTGTTAAGTTCATGGAAGAATGTTCGTCATCATGGagttcttcttcatcttttatGTTAACACACAATTGGTGGCATGTAGCACTTTGCTACTTAGAAGGCAATGCTCCAATGCAAAGAGTACTCGAGGTATATGACAATTATATATGGAAGGAATTAGACAAAACTGGTGCTGCGGCTCCCGAGGTTTACTTAAATGCTGTGGCTCTGCTTCTGCGGTTGTGCGTACGTGATGGATTGGAATTTTTTGGTGATCGACTCCAGAAGCTTGCAGATTGCCTTGCTGATCAAGCAAACTGGTATTTAGAGTGGCACCTTGATGTATTGACAGTTTGGGCTTTGGCAAAGACTGGACAAATTTCTAAAGCAGAAGATCTTCTTAAGGGCTTAAAACAAAGGATTTCGAGGATGACTGAAAAGAAGCAACAAATAATGCAGAAAGGAATGATGCTTGCAGAAGTACTTTATGCATATGGAAGAGGTAACTACAAATATGGATTAGAACTTCTTGGTCCAGATTTTGATGGCAATGATTGCAAGATAATTGGTGCATCTGATGAACAAGTTGATGTATTCAACGAAGTTTGGTACATCATGTTGTTGAACAGCGGAGACGCAACAAAGGCAATTGAAGTAATTGATAAGCGAATCAAGAAGAGAGACGGAACTGCTTTCATATGGCGTTTGCTGgAGAGAGGATACAAACTAGCAAAGAGACCAGAAGCTGAAATTGCAAATGAGAAAGCCAAGTTTTTCGAGAGTGCTTATTTTAATTAA 1416 0.4032 MEEEEGRIKLDGCGYDVKTSSQLCISAINSYYHQVLNYGRKRCVILEAVVHDNNCVLANTLAAHYVYSSDSSRATSLLHSAKSHLEHATLYEKLVFDAISYLMSQDRDDDVAIELHSKLLMQFPRDLVSLKRAQILCFYMGRPDLSLSLVNQVLPQNEEENYIYGMLAFPLLELGRMKDAEEAAKRGFEINKHDGWSQHALCHVLQYECRFREAVKFMEECSSSWSSSSSFMLTHNWWHVALCYLEGNAPMQRVLEVYDNYIWKELDKTGAAAPEVYLNAVALLLRLCVRDGLEFFGDRLQKLADCLADQANWYLEWHLDVLTVWALAKTGQISKAEDLLKGLKQRISRMTEKKQQIMQKGMMLAEVLYAYGRGNYKYGLELLGPDFDGNDCKIIGASDEQVDVFNEVWYIMLLNSGDATKAIEVIDKRIKKRDGTAFIWRLLERGYKLAKRPEAEIANEKAKFFESAYFN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01697 471 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 11 469 IPR033891 -
Tsu05g01697 471 Coils Coil 333 360 - -
Tsu05g01697 471 CDD StaR_like 51 410 IPR033891 -
Tsu05g01697 471 Gene3D Tetratricopeptide repeat domain 29 455 IPR011990 GO:0005515
Tsu05g01697 471 SUPERFAMILY TPR-like 105 231 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01697 Tsu-Chr5 17338298 17344201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01697 - - lja:Lj2g3v1349460.1 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01697 05 17338298 17344201 Tsu05g01697 05 17338298 17344201 ECH