Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01686 ATGCATTTTCGCTTCCCTTCACTTCTTCTTCTCAccattttccttttcctacttCCTTCTTCAATTCAATCTCAAATGTGCCAAAGAAGCTGTGGCAAAGAAACTCTCAAGTACCCTTTTGGTAGCGGCCCCGGTTGCGGCGACCCTCGCTTCCAACCACATATAACTTGTAGCCAACAAAAACTCACATTCACAACACACACAGGTTCCTACCCTATAACCTCAATTGACTATTCCAATCAAGTCATATACATTTCGGATCCTACCATGTCAACATGTTCTTGTACTTTACCTAGCAAAGGTTTCGGCTTAGATTGGAACGCGCCTTTTACCTTCGACGATAGCACAATATTCGCTTTAGTAGATTGTTCGATGAACTCATCGTCGATATGCAAAACACGAAGTTATGATGATGGAAGTAATTCTAAGCTTCAATGTGACCAAAATACACAAATTTGTGATGCTATGTATTCTTGTAGACCTAGTAGTATTAATATTAATCTTCCGATTTCGACATGTTGTGTTTATACGCCGGTTAATCTTGGTCCATCATTTGATATGGATCTTGATAAGCTTCAATGCAGTTCTTATACAGGTTTTTACAATTACAATGATCAACAAGTTGATCCTCAAAAGTGGAACTATGGAATAGCTCTTAAGTATAAGTTTAGTGTCACAAATGATTATCCTAGCTCATGTGATGCATGTGAAAAGAGTTATGGATTTTGTGGTTATAGTGAAGCTTATAATTCATTTCTATGCAATTGTCCTAATGGAATTAACACCACAACAGATTGTTTCTTCACATCATCTTACAATCATGGTTTTAGAAATGGGGTTGCTTGGTTGATTAATGCTGTGGCATGGTCTTTGGTTAGGCTTATCTTGTAA 891 0.3681 MHFRFPSLLLLTIFLFLLPSSIQSQMCQRSCGKETLKYPFGSGPGCGDPRFQPHITCSQQKLTFTTHTGSYPITSIDYSNQVIYISDPTMSTCSCTLPSKGFGLDWNAPFTFDDSTIFALVDCSMNSSSICKTRSYDDGSNSKLQCDQNTQICDAMYSCRPSSININLPISTCCVYTPVNLGPSFDMDLDKLQCSSYTGFYNYNDQQVDPQKWNYGIALKYKFSVTNDYPSSCDACEKSYGFCGYSEAYNSFLCNCPNGINTTTDCFFTSSYNHGFRNGVAWLINAVAWSLVRLIL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01686 296 Pfam Wall-associated receptor kinase galacturonan-binding 27 87 IPR025287 GO:0030247
Tsu05g01686 296 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 8 282 - -
Tsu05g01686 296 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 8 282 - -
Tsu05g01686 296 Pfam Wall-associated receptor kinase C-terminal 206 258 IPR032872 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01686 30 124 Receptor kinase-like Gene Family AT5G02070 34.000 7.00e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01686 - - gmx:100788392 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01686 05 17200774 17202183 Tsu05g01686 05 17200774 17202183 ECH