Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01684 ATGAAGAAGGTAAAGCTTGAACTGTTCACACTTCCCAATAGACTCACACTGATTCAAATTTTCATGGTGATTATGATTCTCTATATGCTCTTCATGAGCTTTGAAATACCCTTAGCTTTCAAAGCAGGTTTTGGTTCAGAAACTGTTGCTATTGGTTTTCTCACCGACGCAATGCCACTTTTAGCAGAACAAAACCACCAAAAAATTCTACCCTTTAAGCTACCATTAACGAAAGTTTCAACCTTGAGCTTTAACAAAAGCTTTGAAGGTGTATCAGAGCTTCACAAGGTAGCAAAACATGCTTACATTTCAGGGAAGAAATTATGGGAAGAAGTTGAAAGTGGTAAAGTTAAAAGCTTTTTAACTTCTAAGGTTGAAAACGGTTCAGATTCTTGTTTAAATTCAGTTTCAGTTTCTGGGTTTGAGTTTAAGGAAAAGTTAAAAGGGGTTATGGTTTTGCCTTGtgggttgacactttggtctcATGTTACTGTTGTTGGGACACCACGTTGGGCTCATGGTGAGAGTGATTCAAAGATTGGGGTTGTTAAAGATCGCGATGAAGCGGTTATGGTTTCGCAGTTTATGATGGAGTTACAAGGTTTGAAAGCTGTTGATAATGAGGAACCACCTAGGATATTGCATTTTAATCCTAGGATTAAAGGGGATTGGAGTGGAAAGCCTGTTATTGAACAGAATACTTGTTATAGGATGCAATGGGGGACTGCTCTTAGGTGTGAGGGATGGAAGTCTAGAGCTGATGAGGAAACTGTTGATGGACAGGTGAAATGTGAGAAATGGATTCACGATGATGATAATCGATCGGAAGAGTGGAAGGCAACATGGTGGTTGAACAGACTAATGGGGCGAAAAAAAGTTGTGCCCATAGACTGGCCATATCCTTTTGCTGAGGGGAAATTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATGTTACTGTGGATGGGAGGCACGTGACGTCCTTTCCGTATCGCACAGGCTTTGCTCTTGAGGATGCTACTGGACTATCCATAAACGGGGACGTCGACGTGCATTCTATATATGCTGCTTCATTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAGTGGAAGGCTCCACCTATTCTCGGTGTGAACTTAGAGCTTTTCATTGGTATCCTTTCTGCTGGCAACCATTTTGCCGAACGTATGGCAGTGAGGAAGTCGTGGATGCAACATAAGCTAATCAAATCCTCACATGTTGTCGCTCGGTTTTTCGTAGCATTGCATGGAAGAAAAGATATAAATGTGGAAATAAAGAAAGAAGCCGAGTATTTTGGTGATATTATTATAGTTCCGTACATGGATCATTATGACCTTGTTGTTTTGAAGACCATAGCTATATGTGAATACGGGATTCGCACGGTGGCTGCTAAGTATATCATGAAATGTGACGATGACACATTTGTTAGAGTGGATTATGTCATAAGCGAAGCAAGACAAGTTCAAAGTGGTAAAAGCCTTTATATGGGAAATATGAATTACCACCACAAGCCTTTTCGCAGTGGGAAATGGACTGTAACTTACGAGGAATGGGTAGAGGATGAGTATCCTACCTACGCTAATGGTCCCGGTTACATCATCTCATCTGACATTGCTCAGTTCATTGTATCTGAATTCGAACGGCAAAAATTAAAATTATTTAAAATGGAAGATGTGAGCATGGGAATGTGGGTAGAGCAATTCAACAGCTCAAGAGAAGTGGAGTATGTACACAGCCTTAAGTTCTGCCAATTCGGGTGCATCGAAGATTACTACACCGCGCATTACCAATCTCCGAGACAAATGACATGCATGTGGGATAAATTGCAACATCAAGGTAAACCACTTTGTTGCAACATGAGATGA 1917 0.4053 MKKVKLELFTLPNRLTLIQIFMVIMILYMLFMSFEIPLAFKAGFGSETVAIGFLTDAMPLLAEQNHQKILPFKLPLTKVSTLSFNKSFEGVSELHKVAKHAYISGKKLWEEVESGKVKSFLTSKVENGSDSCLNSVSVSGFEFKEKLKGVMVLPCGLTLWSHVTVVGTPRWAHGESDSKIGVVKDRDEAVMVSQFMMELQGLKAVDNEEPPRILHFNPRIKGDWSGKPVIEQNTCYRMQWGTALRCEGWKSRADEETVDGQVKCEKWIHDDDNRSEEWKATWWLNRLMGRKKVVPIDWPYPFAEGKLFVLTISAGLEGYHVTVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIYAASLPTSHPSFAPQMHLELLPQWKAPPILGVNLELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHGRKDINVEIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTVAAKYIMKCDDDTFVRVDYVISEARQVQSGKSLYMGNMNYHHKPFRSGKWTVTYEEWVEDEYPTYANGPGYIISSDIAQFIVSEFERQKLKLFKMEDVSMGMWVEQFNSSREVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWDKLQHQGKPLCCNMR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01684 638 Pfam Galactosyltransferase 405 586 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu05g01684 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 151 357 IPR013320 -
Tsu05g01684 638 Gene3D - 389 628 - -
Tsu05g01684 638 Pfam Galactoside-binding lectin 150 357 IPR001079 GO:0030246
Tsu05g01684 638 Gene3D - 141 357 - -
Tsu05g01684 638 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 7 638 - -
Tsu05g01684 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 638 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu05g01684 638 CDD GLECT 153 356 IPR001079 GO:0030246
Tsu05g01684 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 149 359 IPR001079 GO:0030246
Tsu05g01684 638 SMART Gal_bind_lectin_2 153 358 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01684 Tsu-Chr5 17169077 17173584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01684 5 638 Glycosyltransferase AT1G74800 60.389 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01684 K20843 - gmx:100803219 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01684 05 17169077 17173584 Tsu05g01684 05 17169077 17173584 ECH
Tsu05g01684 05 17169077 17173584 Tsu05g01684 05 17169077 17173584 PCT