Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01682 ATGGGAGCATGTGTGTCAACTCAACAAGGTGGTTGTGTTGGTGGAAGGTTCAATTCTTCtaagaagaaaaatagaaaaagaagaagaattgtTGGATTAAGGAGAAGAGTTTCTTCTAAGTTATCATCTTTGGAAAATAACAAAGTTGATTTGCAAAGTTTGCCTCAACATTCATTTTCCAACCCAACTTTTCAagGAAGTATTGAAGAAGCATGGTTCGATTCGGTTACAATGTTTGATTCCGACTGCGATGACGATTACCAGAGTGTTCCTGATGATGTTCTATCTCCGAATGGAATTGAAGGCGGATATGTATCAAGTTTTCCATCTTCAAGAGATGTTACCAACCATAGAGTTTCAACTGATCAAGTGCAGAAACCGATTATTTACGAGGCTGCAAGAACTTCAGATGTTCAACATTTTGGTGTAGATGGAAATATAATTGAAGTAAATGAACCTGTATTCCTCGACGACATTTCCTCAGTTGATGCgaattctaataaagacgaagGAATTTTGGACAACTGCGGCATTCTTCCAAACAATTGTTTACCATGTCTTGCATCTACCATTCCTTCTCTTGAAAAAAGAAGATCATGTTCAAGTCCTCCTAATTCAAAGAAGAAGGCTCTTCCGAAACTTTCTACTCGATtTTCATCGAAAACACTTCTACAAAGACCAATTGCAGGTTCTCAAGTACCCTTTTGTCCAATTGACAAGAAAATGCTTGATTGTTGGTCACACATTGAACCAGGAAGTTTCAAAGTCCGAGGTGTAAATTATTTCAAAGACAGAAAGAAGGAGTTTGCTCCTAACTATTCTGCATATTATCCATTTGGAGTTGATGTTTTCTTATCTCCGCGAAAAGTGGACCATATAGCTCGGTTTGTCGAACTTCCTTCTGTTAGTTCCTCTGCCAAATTTCCACCAATTCTTGTTGTAAATGTTCAGATTCCGCTTTACCCTACGACCCTTTTTCAAGGTGAAACCGATGGCGAAGGAGCGAGCTTTGTTTTGTACTTTAAACTTTCGGAAAGTTACGCCAAGGAACTTCCTCTACATTTTCAAGAAAACATCAGAGTAAGCTGGATTCATCTCGCTTAA 1104 0.3696 MGACVSTQQGGCVGGRFNSSKKKNRKRRRIVGLRRRVSSKLSSLENNKVDLQSLPQHSFSNPTFQGSIEEAWFDSVTMFDSDCDDDYQSVPDDVLSPNGIEGGYVSSFPSSRDVTNHRVSTDQVQKPIIYEAARTSDVQHFGVDGNIIEVNEPVFLDDISSVDANSNKDEGILDNCGILPNNCLPCLASTIPSLEKRRSCSSPPNSKKKALPKLSTRFSSKTLLQRPIAGSQVPFCPIDKKMLDCWSHIEPGSFKVRGVNYFKDRKKEFAPNYSAYYPFGVDVFLSPRKVDHIARFVELPSVSSSAKFPPILVVNVQIPLYPTTLFQGETDGEGASFVLYFKLSESYAKELPLHFQENIRVSWIHLA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01682 367 PANTHER CW14 PROTEIN 1 360 - -
Tsu05g01682 367 PANTHER PLANT/F14N23-31 PROTEIN 1 360 - -
Tsu05g01682 367 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 246 348 IPR009769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01682 Tsu-Chr5 17141261 17143995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01682 - - aprc:113869019 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01682 05 17141261 17143995 Tsu05g01682 05 17141261 17143995 ECH
Tsu05g01949 05 22212539 22217495 Tsu05g01682 05 17141261 17143995 PCT