Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01652 ATGGCTCTATCACGTTTAGCTTCATCTTCAACCGTCGGATCAAATCTCATCAAACCAATCACCGCCGCCATATCTCTTCACCACCGTCCGATCTCCTCCGACGCAACCACCACTCTCACAATCGAAACCTCCCTCCCTTTCACCGCCCACAACTGTTCACCACCGTCCACCTCCGTCACCACAACCCCCTCCGAACTCCTCTCCTTCTTCCGCACCATGGCCTTAATGCGTCGAATGGAAATCGCCGCTGATTCACTCTACAAATCAAAGCTCATCCGCGGTTTCTGTCACCTTTACGACGGTCAAGAAGCCGTCGCAGTCGGTATGGAAGCATCAACAACTAAAAAAGACTGTATAATTACTGCTTACCGTGATCATTGTACTTTTCTCGGTCGCGGAGGAACCCTAATTGAGGTTTATTCTGAACTTATGGGTAGAATTGATGGATGTTCTAAAGGGAAAGGTGGTTCAATgcatttttataagaaagatTCTGGTTTTTATGGTGGTCATGGAATTGTTGGTGCTCAAGTTCCACTTGGTTGTGGTTTAGCTTTTGGTCAAAAATATTTGAAAGATGAAAGTGTTACTTTTGCTTTGTATGGTGATGGTGCTGCTAATCAAGGGCAACTTTTTGAAGCTCTTAATATTGCTGCTCTTTGGGATCTTCCTGCTATTTTGGTTTGTGAAAATAATCATTATGGAATGGGGACTGCTGAGTGGAGAGCTGCTAAGAGTCCTGCTTATTACAAGAGAGGGGATTATGTTCCTGGATTGAAGGTAGATGGCATGGATGTTCTTGCTGTGAAACAAGCTGTTAAATTTGCAAAGGAGCATGCTTTGCAAAATGGGCCCCTTATTCTTGAAATGGACACTTACAGATACCATGGTCACTCTATGTCTGATCCTGGAAGCACATACCGAACACGTGATGAAATTTCTGGTGTCAGACAGGTTTGTATGTTTCTCAGCACGTAA 978 0.4387 MALSRLASSSTVGSNLIKPITAAISLHHRPISSDATTTLTIETSLPFTAHNCSPPSTSVTTTPSELLSFFRTMALMRRMEIAADSLYKSKLIRGFCHLYDGQEAVAVGMEASTTKKDCIITAYRDHCTFLGRGGTLIEVYSELMGRIDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQAVKFAKEHALQNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVCMFLST 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01652 325 Pfam Dehydrogenase E1 component 72 318 IPR001017 GO:0016624
Tsu05g01652 325 CDD TPP_E1_PDC_ADC_BCADC 69 314 - -
Tsu05g01652 325 Gene3D - 25 321 - -
Tsu05g01652 325 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 14 318 - -
Tsu05g01652 325 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 14 318 - -
Tsu05g01652 325 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 61 316 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01652 Tsu-Chr5 16457059 16460313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01652 1 319 Acyl Lipid Metabolism Gene Families AT1G24180 79.062 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01652 K00161 - cit:102613187 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01652 05 16457059 16460313 Tsu05g01652 05 16457059 16460313 ECH