Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01644 ATGCTTCCTTTACGCTTAACCATCGTCgtttcatctcttttcttctgtTGCCTTTTCCAACCATTCTGTCTTGGAATCCGTTCTTTTCCAACAACCACCGAAACAACCACCGTCGCTAACCCATTTCACTTCTCAGAAGCACCCGATTATAGAAACGGAGCGGGTTGCCCCATACCCGAAAACAACATCAAAAACCCGTTTCCTTCATCATGTGACCCATCATTAGTTCACATCGCAATGACACTCGATTCCGGTTACCTACGTGGAAGCATCGCCGCCGTTCATTCCGTTCTTCGCCACTCATCATGTCCAGAAAAcgttttctttcatttcatttccGCTGAGTTCGACCCAGCGAGTCCACGAGTCTTGACTCGTTTAGTAAGATCTATTTTTCCTTCACTAAACTTCAAAGTTTACATTTTTCGTGAAGATACAGTGATAAATCTTATCTCATCTTCAATTCGTTTAGCACTTGAAAACCCATTAAACTATGCAAGAAATTATCTTGGTGATATTCTTGATTCATGTGTTGAAAGAGTTATCTATCTTGATTCagatattgttgttgttgatgatattttcaaaCTATGGAGTGTGAAAATGGGTTCAGAAAAAGTTATAGGTGCACCTGAATATTGTCATGCAAATTTCACTAAATATTTCACTGATGAATTTTGGGTTGACCCATTATTATCAAAAGTATTTAGAACAAGAAAGCCTTGTTATTTCAACACTGGTGTAATGGTAATGGATATGGTGAAATGGAGAAAAGGGGGGTatagaagaaaaattgaaaattggatGGAAttacagaagaaaaaaaggatTTATGAATTGGGTTCATTACCAccttttttacttgtttttggTGGAAATGTTGAAGCTATTGATCATAGATGGAATCAACATGGATTAGGGGGTGATAATTTGAATGGTGTTTGTAGATCTTTACATCCTGGTCCAGTTAGTTTGTTACATTGGAGTGGTAAAGGTAAACCTTGGGTTAGACTTGATGAGAAAAAAGCTTGTCCTTTAGATTCATTATGGGAACCTTATGATCTTTATAAGCCAAGAAATTTTATGGTTCATCATGGTAGTGATggaaaaaatcaagaaattgaTCAACCTTGgagtttttcttcttcaattttggtTGGTTATGCTCATGATTTGCTATGA 1182 0.3274 MLPLRLTIVVSSLFFCCLFQPFCLGIRSFPTTTETTTVANPFHFSEAPDYRNGAGCPIPENNIKNPFPSSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFISAEFDPASPRVLTRLVRSIFPSLNFKVYIFREDTVINLISSSIRLALENPLNYARNYLGDILDSCVERVIYLDSDIVVVDDIFKLWSVKMGSEKVIGAPEYCHANFTKYFTDEFWVDPLLSKVFRTRKPCYFNTGVMVMDMVKWRKGGYRRKIENWMELQKKKRIYELGSLPPFLLVFGGNVEAIDHRWNQHGLGGDNLNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKKACPLDSLWEPYDLYKPRNFMVHHGSDGKNQEIDQPWSFSSSILVGYAHDLL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01644 393 SUPERFAMILY Nucleotide-diphospho-sugar transferases 76 362 IPR029044 -
Tsu05g01644 393 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 12 362 - -
Tsu05g01644 393 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 77 352 IPR029044 -
Tsu05g01644 393 Pfam Glycosyl transferase family 8 77 337 IPR002495 GO:0016757
Tsu05g01644 393 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 12 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01644 Tsu-Chr5 16366911 16368417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01644 2 357 Glycosyltransferase AT1G70090 72.652 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01644 - - gmx:100813364 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01644 05 16366911 16368417 Tsu05g01644 05 16366911 16368417 ECH