Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01597 ATGAAACTCATACAAAAAAGTGCGTCAAGGAGGACTGAAAGTAATGATGGCAGTAAAAGGAATATCGATCTCCGTGAAAAGTTGTCAAAGACAGCTCACCCTCCAACAAACAGTTTTAATTCAAAGCAGCGCATGCCTGAACCAAGGGAACCAAGGGAAACAAGCTTGTTCAGACCAGTTTCATCAGCTAGAAGTTCTGATGATATAATGCGTATGGAATCAATGAGAAGCTCATTCTCTCCTTGGACACTTGATCAAATTCGGCAAAGATCACCAGATGGGTTTCCAAGTTCTTCCAGGGGGATTTCCCCCCAAAGAAATGTTAGAGACCTACAGGGTAGGCCAGTAAACAGGACATATGATGGCGTCAGACCAGTTCCATATGCTGGCAGGGATGTTCTTGAAACTTCAAGGCCTCCAAGTGCTGCACCTTCATCTTTCATGTCACGACCCACAATATCAACATTGCCTCCGGCAACTGCTAAGCCTGTAGCATCTCATCCTAGACAACTTCCTCCTTCAAGCAGTGTTGCACAAAGGGCTCCATTTGTGGGCGATGAACAGCAACCACAAACTGTTGATGGCCTGTTACAAATACTGGGACtacaaaaatatcaaattctTTTCAAGGCCGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGAATTCCTATGGGTCCAAGGAAAAAACTACTTCTTGCACTCATGCCTCGTAAACGTCAACAGTGA 756 0.4405 MKLIQKSASRRTESNDGSKRNIDLREKLSKTAHPPTNSFNSKQRMPEPREPRETSLFRPVSSARSSDDIMRMESMRSSFSPWTLDQIRQRSPDGFPSSSRGISPQRNVRDLQGRPVNRTYDGVRPVPYAGRDVLETSRPPSAAPSSFMSRPTISTLPPATAKPVASHPRQLPPSSSVAQRAPFVGDEQQPQTVDGLLQILGLQKYQILFKAEEVDMTALKQMGENDLKELGIPMGPRKKLLLALMPRKRQQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01597 251 Pfam SAM domain (Sterile alpha motif) 188 244 IPR001660 GO:0005515
Tsu05g01597 251 MobiDBLite consensus disorder prediction 1 30 - -
Tsu05g01597 251 MobiDBLite consensus disorder prediction 1 190 - -
Tsu05g01597 251 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 2 249 - -
Tsu05g01597 251 PANTHER OSJNBA0060P14.15 PROTEIN 2 249 - -
Tsu05g01597 251 Gene3D - 185 251 IPR013761 -
Tsu05g01597 251 MobiDBLite consensus disorder prediction 139 156 - -
Tsu05g01597 251 MobiDBLite consensus disorder prediction 72 112 - -
Tsu05g01597 251 ProSiteProfiles SAM domain profile. 188 251 IPR001660 GO:0005515
Tsu05g01597 251 SUPERFAMILY SAM/Pointed domain 189 245 IPR013761 -
Tsu05g01597 251 SMART SAM_4 185 250 IPR001660 GO:0005515
Tsu05g01597 251 MobiDBLite consensus disorder prediction 169 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01597 Tsu-Chr5 15532996 15539591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01597 187 244 Glycosyltransferase AT3G07170 56.897 8.98e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01597 - - gmx:100797199 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01597 05 15532996 15539591 Tsu05g01597 05 15532996 15539591 ECH