Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01527 ATGGCAGCTCTTCGTGGTAAGCTAGAGGTAGACATTGAACTCAAGTCTAATGCTGATAAGTACTGGCAAACCATAAGGGATTCTACAACTATTTTCCCTAAGGCCTTCCCACATGACTACAAAAGCATTGAGATCCTTGAAGGTGATGGTAAAGCTGCTGGTTCTATTCGCCACTTCACTTATGCTGAAGGATCACAACTTGCGAAATCGTCGACAGAGAGAATTGAGGCTGCTGATGATGAAAAGAAGACAGCAACCTATTCTATAATTGAAGGAGATCTTCTTCAATACTACACAAAATTCTTGGGACACATAGCTGTAATTCCCATTGGAGAAGGGTGTGAGCTGAAATGGACAGGTGAATATATAAAAGTTAAGAATGATATTCCTGATCCAACTATTGTCAAAGATTTTGCAGTCAAGAATTTCCTTGAGGTGGATGACTATATTCAACAAAATGCATAG 465 0.3957 MAALRGKLEVDIELKSNADKYWQTIRDSTTIFPKAFPHDYKSIEILEGDGKAAGSIRHFTYAEGSQLAKSSTERIEAADDEKKTATYSIIEGDLLQYYTKFLGHIAVIPIGEGCELKWTGEYIKVKNDIPDPTIVKDFAVKNFLEVDDYIQQNA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01527 154 Gene3D - 1 152 IPR023393 -
Tsu05g01527 154 SMART Bet_v_1_2 3 153 IPR000916 GO:0006952
Tsu05g01527 154 CDD Bet_v1-like 6 151 - -
Tsu05g01527 154 PANTHER MLP-LIKE PROTEIN 423 6 151 - -
Tsu05g01527 154 SUPERFAMILY Bet v1-like 3 151 - -
Tsu05g01527 154 PANTHER MLP-LIKE PROTEIN 423 6 151 - -
Tsu05g01527 154 Pfam Pathogenesis-related protein Bet v 1 family 3 152 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01527 Tsu-Chr5 14789835 14791197 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01527 - - mtr:MTR_5g035010 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01527 05 14789835 14791197 Tsu05g01527 05 14789835 14791197 ECH