Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01476 ATGTCAGTTCCTGTTTCCTCCAACGATTCCGTCTCTCACGAACGGAAATTCCTCAAGCACATCCGTGATAACGTTCACGGCAACATCTTTCTCGAACCTATCTTCTTGAAGTTTGTTGACACAGAACAATTTCAAAGACTTCGAGATTTGAAGCAGCTTGGTCTAACTCATATGGTTTTCCCTGGGGCTGTGCACTCTCGTTTTGAGCATTCACTGGGTGTTTATTGTCTGGCTGGCAAAGCTACTgatatcattaaaaaataccAGGGAGCTGAGCTTGGTATTGAAAAATTTGATGTGTTGGCAGTAAAACTTGCTGGATTACTGCATGATGTTGGTCATGGGCCATTCAGCCACACTTTTGAGCGCGGGTTCCTTCCCCTGGTTCTTAATGGTGCCCCTTGGTCTCATGAGGAAATGTCTGAGAAAATGATAGATCACATTGTTGATGAACACCGTATTGATTTGGATTCTCAACTCCTCAAAAAAGTGAAGGAAATGATCACTTCTAGCTCTGACCATCCTCTACAAAGGGAAAAGAAGTTCTTATATGATATTGTTGCAAATGGTCGCAATGGAATTGATGTTGACAAGTTTGACTACATTGTTCGGGATTCACGTGCTTGTGGCCTAGGGTGCAACTTTCAGCCTGAGAGATTGATGGAGACCATGAAAGTTATTGATGATGAAATTTGTTATCGCGCTAATGATTATCTGACAATTCACAAGTTATTTGCAACCCGTGCTGATTTGCATCGAACAGTCTATACACATGCAAAAGTAAAGGCAATAGAGTTGATGGTTCTCGATGCACTGGTGAAGGCAAATCCATATCTTCAGATTGCATCCTTAATTCATCAACCATCGGAGTTTTGGAAGTTAGATGACTCAATTCTTAAAACAATTGAATCTTCTTCCAAGCAAGAGCTGCAAGAATCCAGAGAGTTGATTCTACGTGTTCACAGAAGGGATCTGTACCAGTTCTGCAATGAATTTTCTGTTCCAAAGGACAGACTAGACAAATTCAAAAACATCACACCCCAAGACATTGTTTGTTCCCAGATAAGTGGCACCAAtttggaagaagatgatgtcGCTGTGAGCAatgttaaaattgatttaacACGTGGAATGGAAAATCCTCTTGAAAGgattaattttttcaagGACTACGAGGATAAAGTAAAATTTCCCATCGAAGACCATCGAGTCAGTCATTTGTTGCCAGCATTCTACACAGACATCATAGTGAGAGTATATAGTAAGAAGCCTGAACTGGTGGAAGCTGTTTCTGCTGCCTTTGAAAATTATCAGCTCAAGACATTCGGAAGCAAAGCACAAGTGCACGGAACTCCTAACAAGAAGTGTCGTAGAGTATAA 1380 0.3957 MSVPVSSNDSVSHERKFLKHIRDNVHGNIFLEPIFLKFVDTEQFQRLRDLKQLGLTHMVFPGAVHSRFEHSLGVYCLAGKATDIIKKYQGAELGIEKFDVLAVKLAGLLHDVGHGPFSHTFERGFLPLVLNGAPWSHEEMSEKMIDHIVDEHRIDLDSQLLKKVKEMITSSSDHPLQREKKFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQPERLMETMKVIDDEICYRANDYLTIHKLFATRADLHRTVYTHAKVKAIELMVLDALVKANPYLQIASLIHQPSEFWKLDDSILKTIESSSKQELQESRELILRVHRRDLYQFCNEFSVPKDRLDKFKNITPQDIVCSQISGTNLEEDDVAVSNVKIDLTRGMENPLERINFFKDYEDKVKFPIEDHRVSHLLPAFYTDIIVRVYSKKPELVEAVSAAFENYQLKTFGSKAQVHGTPNKKCRRV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01476 459 ProSiteProfiles HD domain profile. 67 202 IPR006674 -
Tsu05g01476 459 Pfam HD associated region 218 327 IPR045509 -
Tsu05g01476 459 SMART hd_13 63 211 IPR003607 -
Tsu05g01476 459 Gene3D Hypothetical protein af1432 17 324 - -
Tsu05g01476 459 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 1 458 - -
Tsu05g01476 459 PANTHER DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE 1 458 - -
Tsu05g01476 459 CDD HDc 65 210 IPR003607 -
Tsu05g01476 459 SUPERFAMILY HD-domain/PDEase-like 14 445 - -
Tsu05g01476 459 Pfam HD domain 67 203 IPR006674 -
Tsu05g01476 459 Gene3D - 325 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01476 Tsu-Chr5 14135171 14140998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01476 K22544 - gmx:100796869 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01476 05 14135171 14140998 Tsu05g01476 05 14135171 14140998 ECH