Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01473 ATGTTTCATCATAACATTAATATGAACAAACAACTCATCATCCTTATGTGTCTCTCTATCCTCTTCTCATCTATCACTGTTAATTCCGCCGGAGATACGGTGGCCGGAGAAAAAAACCCATTCACACCAAAAGCATTTCTGAATCGTTATTGGGACAAAGAGATCCGCAACGGTTTACCAAAGCCGTCGTTTTTGTTCTCCAAAGCGTCACCTTTAACTACGGTGGAAGCAGCGAGTTTTGCTAAACTCGCCGCCGGTAACACACTTTCCACACGGCTGCCGGAATTTTGCTCCGTTGCAAATCTCCTCTGTATCCCTGAGGTTGCTCAGAGTCTTGAAAAACACGACAAAGATGGAAGCTTCGCCGTGTACGGTGACAAGAACTTCACAAACTACGGAACGAGTCGACCCGGTGGAGTTGACTCGTTCAAAAACTATTCCGACGGTGCAAATATTCCGGTGAACGATTTCCGTCGCTACAGCCGTAACTCCGCCGGCCATGAAGAAAGTTTCACCAGCTATGCTACAGAAGGTAACGTTGTTGATCAAAGCTTTCACACTTACGGTGCCGGAGCAACCGGCGGCGCCGGCGAGTTCAAACAATACACCGACGAAACCAATGTTCCTAACTTAGTTTTCTCTTCTTATTCCGATAACGCCAACGGAAGAACACAATCATTCAACTCTTACACCGAAAACGGTAATGCCGGAGAACAATCGTTTTCTTCCTATGGTAAAAACGGTAATGGACCCACTGAAGAATTCACTAGTTATGGAACAAGTTCCAATGTTGTTGGATCGGGTTTTTCAAACTACGCCGAAACCTCGAATGCTGGTAATGACAGCTTTAAAGGTTACGGCGTAGATATGAATAACCCGACCAATACTTTTTCTAACTATGCTAACGGAGGCAATGGCGatattcaaacattttcaacTTACCGTGAAAAAGCTAATGTTGGTGCTGATTCTTTTACAAGCTATGCAAAAAGTTCAAATGCGGCGAAAATCGGTTTCAATAACTATGGAAAATCTTTCAATGAAGGAACTGATACATTCACAAGCTATGCTAAAACATCAACAGGTGAAACAAAGGTTGATTTTAAAGGCTATGGTGTTAACAATACATTCAAAGAGTATTCAAAAGAAGGTGTTTCTTTTGCAAAGTATACAAATGTGAGTTCAAGTTTAACTGCTTctttcaaagagaaaaaaaacacgGTGGTggagggtaatttggtaaaaaaatgggTTGAACCAGGTAAGTTCTTTAGAGAAAAGATGTTGAAAGAAGGAACTGTTATGCCTATGCCTGATATTAGTGATAAGTTACCGAAAAGGTCGTTTTTACCGCGGAGTATACTTGCAAAATTACCGTTTTCTACTTCGAAAATCGATGAAATGAAAAGGTTGTTCAAAGCTTCGGATAATGGTTCGATGGAGAAGATGATGAGAGATTCATTGGGTGAATGTGAGAGAGTTCCGAGCCGTGGTGAGACAAAGCGATGTGTAGGGTCTATTGAGGATATGGTTGATTTTGCAACTTCTGTTTTGGGTCGAAATGTTGTGGTTCGGACTACTCAGAATTTAAATGGGTCGAAGAAGAGTGTTATGGTGGGTCGGGTTATTGGAATAAACGGTGGGAAAGTTACTCGGTCTGTTTCGTGTCATCAGAGTTTGTTTCCTTATTTGCTTTATTATTGTCACTCGGTTCCTAAGGTTCGGGTTTATCAGGCCGATTTACTTGACCCGAAAACTAAAGATAAGATTAATCAAGGCATTGCGGTTTGCCACTTGGATACTTCTGATTGGAGTGCTAGTCATGGAGCTTTTATGTCTCTTGGGTCGGGTCCGGGTCAAATTGAGGTTTGTCACTGGATTTTTGAGAATGATATGTCTTGGACAGTTGCTGATTGA 1917 0.4069 MFHHNINMNKQLIILMCLSILFSSITVNSAGDTVAGEKNPFTPKAFLNRYWDKEIRNGLPKPSFLFSKASPLTTVEAASFAKLAAGNTLSTRLPEFCSVANLLCIPEVAQSLEKHDKDGSFAVYGDKNFTNYGTSRPGGVDSFKNYSDGANIPVNDFRRYSRNSAGHEESFTSYATEGNVVDQSFHTYGAGATGGAGEFKQYTDETNVPNLVFSSYSDNANGRTQSFNSYTENGNAGEQSFSSYGKNGNGPTEEFTSYGTSSNVVGSGFSNYAETSNAGNDSFKGYGVDMNNPTNTFSNYANGGNGDIQTFSTYREKANVGADSFTSYAKSSNAAKIGFNNYGKSFNEGTDTFTSYAKTSTGETKVDFKGYGVNNTFKEYSKEGVSFAKYTNVSSSLTASFKEKKNTVVEGNLVKKWVEPGKFFREKMLKEGTVMPMPDISDKLPKRSFLPRSILAKLPFSTSKIDEMKRLFKASDNGSMEKMMRDSLGECERVPSRGETKRCVGSIEDMVDFATSVLGRNVVVRTTQNLNGSKKSVMVGRVIGINGGKVTRSVSCHQSLFPYLLYYCHSVPKVRVYQADLLDPKTKDKINQGIAVCHLDTSDWSASHGAFMSLGSGPGQIEVCHWIFENDMSWTVAD 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01473 638 ProSiteProfiles BURP domain profile. 423 637 IPR004873 -
Tsu05g01473 638 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 10 638 - -
Tsu05g01473 638 Pfam BURP domain 423 635 IPR004873 -
Tsu05g01473 638 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 10 638 - -
Tsu05g01473 638 SMART BURP_2 421 637 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01473 Tsu-Chr5 14104203 14107220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01473 - - gmx:100776642 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01473 05 14104203 14107220 Tsu05g01473 05 14104203 14107220 ECH