Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01472 ATGGCAGAGGCAAAACAAGGATTGAGGAAGCCGGTGTTTACTAAGGTTGATCAGCTTCGCCCAGGGACTAGCGGACACACCATAACTGTGAAGGTTGTTGATACTAAGATGGTGATGCAGAGAGGTCGTCCTGATGGACCTCAACCCCGTCAAATGCGAATTGCTGAAAGTTTGGTTGGTGATGAGACTGGAATGATCATATTCACTGCAAGAAACGATCAGGTGGATTTGGTGAAAGAAGGCTCCACTATCATCCTGCGTAATGCCAAAATTGACATGTTCAAAGGATCAATGAGACTTGCTGTGGACAAGTGGGGCCGTATTGAAGTCACAGAACCAGCTAGCTTCACTGTCAAGGAAGATAATAACTTGTCCCTGATTGAGTATGAATTGgtgaatgttgttgttgaatga 414 0.4324 MAEAKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQPRQMRIAESLVGDETGMIIFTARNDQVDLVKEGSTIILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEDNNLSLIEYELVNVVVE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01472 137 Gene3D - 23 126 IPR012340 -
Tsu05g01472 137 PANTHER OS05G0244600 PROTEIN 1 134 - -
Tsu05g01472 137 PANTHER F5O8.30 PROTEIN 1 134 - -
Tsu05g01472 137 CDD SoSSB_OBF 27 110 - -
Tsu05g01472 137 SUPERFAMILY Nucleic acid-binding proteins 3 135 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01472 Tsu-Chr5 14038622 14045234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01472 - - mnt:21410383 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01472 05 14038622 14045234 Tsu05g01472 05 14038622 14045234 ECH