Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01462 ATGACCGGCAACGAGTTTCGCTTCTTCTTGTCATGCGATATCAATCTTCCCGTCACTTTCCGCATCGAACGCCTCGAAGGCAATTTGCCCTTTCCAAAATCCCCTAATTCAGAAAATAATGGTTCTGCTGAGGATGTAACTGGAGAGTTATATGTGGAGTGTGCGTTGCATATTGATGGCGCGCCATTTGGACTTCCCACGAGAACGAGGTTGGAGTCCATGGGACCATCATATTGTTGGAATGAGCTCATTACGTTGACAGCTAAATATCGGGATTTGACTGCTCAGTCACAACTCACTTTCACTGTTTGGGATCTTTCTCATGGTGAAGGATTGATTGGAGGAGCCACAATTATTCTCTTTAACAACAAAAAGCAGCTCAAAACAGGGAAGCAAAAGCTTAGGCTTTGGGCAGGAAAAGAGGCAGATGGAACATTCCCTACTTCTACACCTGGAAAGGTCCCTAGGCATGAGCGTGGAGAGTTGGAGCGATTGGAAAAGCTTGTGAATAAATATGAGAGAGGCCAAATTCAACGAGTGGACTGGCTAGATCGCCTCACATTCAAAACTATGGAGAAAATCAAGGAACGCGAAAGCTTGAAAAATGGAAGTTCTCATTTGTATTTGGTTGTGGACTTCTGTAGTTTTGAGCATCGAGTTGTTTTTCAGgaaTCTGGTGCAAATTTTGTGTTGCCATCCCCTATAGCTTCAACCAATGATATTGTTATTGTCTGGGACCCAGAAGTGGGAAAGGTTAATCCCTCTGAGCACAAACAGTTAAAGCTGGCCAGGAGTTTGACCCGTGGTGTCATAGACAGAGATCTTAAGCCAAGCTCAAATGAGAGAAAGTCCATTCAGAGAATTCTAAAGTATCCACCAACAAGGACATTGAGTGGAGATGATAGGCAGCTCTTGTGGAAATTCCGCTTTTCTTTGATGTCTGAGAAGAGGGCTCTAACAAAATTCCTTCGTTGTGTTGAATGGAGTGATGTACAGGAAGCAAAACAAGGACTAGAATTGATGGGCAAGTGGGAAACGATTGATGTTTGTGATGCACTGGAACTTTTGTCTCCGGTTTTTGAAAGCGAAGAGGTCCGGGCTTATGCAGTGAGTGTTCTTGAAAGAGCTGATGATGAAGAGCTTCAATGTTACTTGCTTCAATTAGTTCAGGCTCTTCGGTTTGAACGGTCAGACAAATCTCGCCTTTCTCAATTCCTTGTCCAGCGTGcATTAAGTAATATTGAGTTGGCAAGCTTTCTTCGCTGGTATGTGGCTGTTGAACTTTATGACCCTGCATATGCAAAACGATTTTACTGCACATATGAAATTCTGGAGGAGAATATGATGAAGATGGGAGCTGGTGCAAATGGAGAGGAAGATGGATTTAAGCGGTGGCAGAGTTTGGTACGACAGACAGAATTAACTGCTCAATTGTGTTCTATCACTAGAGATGTAAGGAATGTCCGAGGTAATACGcagaagaaaattgaaaagcTTAGACAGCTACTTTCTGGTCTTCTTAGTGAACTTACCTATTTTGATGAGCCAATACGGTCACCTCTGACACCAGGTGTGCTCATCACTGGGATTGTGCCCTCAGAGTCATCAATATTTAAAAGTGCATTGCATCCTCTGCGACTTACTTTTAAAACAGCAAATGGTGGAACcagtaaaataatatttaagaaAGGGGATGATATTCGCCAGGACCAGTTGGTTGTTCAAATGGTATCATTAATGGATCGATTGCTTAAGTTAGAAAATCTTGACCTGCATTTAACGCCATACAAGGTTCTAGCAACTGGGCAAGATGAAGGCATGTTGGAATTCATTCCATCCCATTCATTAGCGCAGATTTTATCAGAGCATCGCAGCATCATAAGCTATTTGCAGAATTTTCATCCTGATGATAATGGACCTTTTGGAATTACAGCCACCTGTCTCGAAACGTTTATAAAAAGTTGTGCTGGCTACTCCGTTATCACATATATACTTGGTATTGGAGACAGGCACTTAGACAACCTCCTCCTCAGAAACGATGGAAGTCTTTTCCATGTTGATTTTGGTTTTATTCTTGGGCGAGACCCTAAGCCATTTCCACCACCAATGAAGCTTTGCAAGGAAATGGTTGAGGCTATGGGTGGAGCTGAAAGCCAATACTATACAAGGTTCAAGTCCTATTGTTGTGAAGCATACAACATTCTTCGGAAATCAAGTAACCTAATTTTAAATCTATTTTACTTAATGGCCGGTTCCAATATTCCTGACATAGCTTCTGATCCTGAAAAAGGGATTCTTAAACTTCAGGAAAAGTTCCGGTTGGACTTGGATGATGAAGCTTGTATACATTTCTTCCAGGATCTTATCAACGAGAGCGTGAGTGCATTGTTCCCTCAGATGGTTGAGACCATTCATCGCTGGGCTCAATATTGGCGATAA 2439 0.4182 MTGNEFRFFLSCDINLPVTFRIERLEGNLPFPKSPNSENNGSAEDVTGELYVECALHIDGAPFGLPTRTRLESMGPSYCWNELITLTAKYRDLTAQSQLTFTVWDLSHGEGLIGGATIILFNNKKQLKTGKQKLRLWAGKEADGTFPTSTPGKVPRHERGELERLEKLVNKYERGQIQRVDWLDRLTFKTMEKIKERESLKNGSSHLYLVVDFCSFEHRVVFQESGANFVLPSPIASTNDIVIVWDPEVGKVNPSEHKQLKLARSLTRGVIDRDLKPSSNERKSIQRILKYPPTRTLSGDDRQLLWKFRFSLMSEKRALTKFLRCVEWSDVQEAKQGLELMGKWETIDVCDALELLSPVFESEEVRAYAVSVLERADDEELQCYLLQLVQALRFERSDKSRLSQFLVQRALSNIELASFLRWYVAVELYDPAYAKRFYCTYEILEENMMKMGAGANGEEDGFKRWQSLVRQTELTAQLCSITRDVRNVRGNTQKKIEKLRQLLSGLLSELTYFDEPIRSPLTPGVLITGIVPSESSIFKSALHPLRLTFKTANGGTSKIIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYKVLATGQDEGMLEFIPSHSLAQILSEHRSIISYLQNFHPDDNGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRNDGSLFHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFYLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACIHFFQDLINESVSALFPQMVETIHRWAQYWR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01462 812 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 274 448 IPR001263 -
Tsu05g01462 812 PANTHER PHOSPHATIDYLINOSITOL KINASE 20 807 IPR015433 GO:0046854|GO:0048015
Tsu05g01462 812 PIRSF PI3K_Vps34 397 812 IPR008290 GO:0016303|GO:0046854|GO:0048015
Tsu05g01462 812 PIRSF PI3K_Vps34 1 401 IPR008290 GO:0016303|GO:0046854|GO:0048015
Tsu05g01462 812 CDD PI3Ka_III 272 430 - -
Tsu05g01462 812 CDD PI3Kc_III 465 809 - -
Tsu05g01462 812 SMART pi3k_hr1_6 558 810 IPR000403 -
Tsu05g01462 812 SMART pi3k_hr3_6 20 121 IPR002420 -
Tsu05g01462 812 ProSiteProfiles PIK helical domain profile. 272 447 IPR001263 -
Tsu05g01462 812 ProSiteProfiles C2 phosphatidylinositol 3-kinase (PI3K)-type domain profile. 14 175 IPR002420 -
Tsu05g01462 812 CDD C2_PI3K_class_III 1 176 - -
Tsu05g01462 812 Gene3D - 613 812 IPR036940 GO:0016301
Tsu05g01462 812 PANTHER PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYPE 3 20 807 - -
Tsu05g01462 812 SUPERFAMILY Protein kinase-like (PK-like) 465 804 IPR011009 -
Tsu05g01462 812 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 654 674 IPR018936 GO:0016301
Tsu05g01462 812 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 561 575 IPR018936 GO:0016301
Tsu05g01462 812 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 44 155 IPR035892 -
Tsu05g01462 812 Gene3D - 237 446 IPR042236 -
Tsu05g01462 812 Pfam Phosphatidylinositol 3- and 4-kinase 557 758 IPR000403 -
Tsu05g01462 812 Gene3D C2 domain 13 163 IPR035892 -
Tsu05g01462 812 Gene3D - 462 611 - -
Tsu05g01462 812 Pfam Phosphoinositide 3-kinase C2 49 188 IPR002420 -
Tsu05g01462 812 SMART pi3k_hr2_4 272 457 IPR001263 -
Tsu05g01462 812 SUPERFAMILY MHC antigen-recognition domain 216 258 IPR011162 -
Tsu05g01462 812 SUPERFAMILY ARM repeat 256 445 IPR016024 -
Tsu05g01462 812 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 531 797 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01462 Tsu-Chr5 13904998 13916954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01462 1 812 Acyl Lipid Metabolism Gene Families AT1G60490 83.681 0.0 1413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01462 K00914 - gmx:547983 1531.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01462 05 13904998 13916954 Tsu05g01462 05 13904998 13916954 ECH