Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01454 ATGTGGAATGTGGCAAATGATTATCTTCGTGAGGTTCCTCCCAATCAGCTCTATGCCGCTGCTGCTATTGTCGTTTTCACAACCCTGCTTCTTCTCTTACTGCGGGTTTTGAAGCGCACCAAGTCTAACACCATTGTGTTGACGGGACTTAGTGGGAGCGGGAAAACCGTTATCTTCTATCAGCTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGACACTTTTATTCTTCATGGCGAAACAACGAAGAAGGGAAAGATAAAACCGGTTCATATTGTTGATGTTCCTGGACATTCTCGTCTTCGACCCAAATTGGATGAGTACTTGCCTCAAGCAGCTGGCATAGTCTTTGTTGTAGATGCTTTGGACTTCTTACCAAATTGCCGTGCTGCCTCAGAGTACCTATATGATCTGTTAACGAAGGGAAGTGTTGTGAGGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACTGACAAAGTCACTGCTCACACCAAAGAATTTATCCGCAGACAAATTGAGAAAGAAATTGACAAATTACGGGTATCAAGAAATGCAGTTTCAGATGCTGACGTTACAAATGAGTTTACTTTGGGGGTACCTGATGAGCCATTTTCCTTTACACAGTGCGCCAACAAAGTTACAACTGCAGATGCATCTGGTTTAACCGGGGAGATATCTCAGCTAGAAGAGTTTATCAGAGAACATGTGAAGCCATAA 741 0.4305 MWNVANDYLREVPPNQLYAAAAIVVFTTLLLLLLRVLKRTKSNTIVLTGLSGSGKTVIFYQLRDGSTHQGTVTSMEPNEDTFILHGETTKKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAHTKEFIRRQIEKEIDKLRVSRNAVSDADVTNEFTLGVPDEPFSFTQCANKVTTADASGLTGEISQLEEFIREHVKP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01454 246 CDD SR_beta 43 242 IPR019009 -
Tsu05g01454 246 Gene3D - 36 244 IPR027417 -
Tsu05g01454 246 PANTHER TRANSFERRIN 5 246 - -
Tsu05g01454 246 ProSiteProfiles small GTPase Arf family profile. 36 240 - -
Tsu05g01454 246 Pfam Signal recognition particle receptor beta subunit 41 221 IPR019009 -
Tsu05g01454 246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 192 IPR027417 -
Tsu05g01454 246 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 5 246 IPR019009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01454 Tsu-Chr5 13839900 13842180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01454 7 246 Miscellaneous Gene Families AT5G05670 73.029 1.02e-132 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01454 K12272 - gmx:100800572 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01454 05 13839900 13842180 Tsu05g01454 05 13839900 13842180 ECH