Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01450 ATGGCGCGTAAGAAGATCAGAGAGTATGATTCCAAGAGATTGTTGAAGGAACACTTTAAGAGACTTTCTGGCAAGGACTTACCTATCAAGTCTGCACAAGTTACGGAGGCCACTGATTTCACTGAGTTGCAAGACAAGGAACCTTGGCTTTCTTCTTCTAAATTGGTTGTGAAACCTGACATGTTATTTGGGAAGCGTGGTAAAAGTGGTTTGGTTGCCTTGAATTTGGATTTGGCACAAGTTGCTTCATTCGTGAAAGAGCGTCTTGGTAAAGAGGTTGAAATGGGTGGATGCAAGGGACCAATAACAACTTTCATTGTTGAACCTTTCATCCCGCATAATGAAGAGTTTTACCTTAACATCGTCTCTGACAGACTTGGGAACAGCATAAGCTTTTCAGAATGCGGAGGAATCGATATTGAAGAGAATTGGGATAAGGTTAAGACTGTATTTGTTCCAACAGGAGTATCTCTTACATCAGAAATTGTTGCTCCACTTGTTGCAACCCTTCCCTTGGAGatcaAAGGAGAAATCGAGGAATTTCTCAAGGTGATTTTCACTCTGTTTCAAGACCTGGATTTCACTTTCTTGGAGATGAATCCTTTCACATTGGTTGATGGAAAGCCTTATCCATTGGATATGAGAGGCGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAGAAGTGGGGTAACATTGAATTTCCACTGCCATTTGGAAGGGTTATGAGTGCCACCGAGTCTTTCATTCATGGACTAGATGAAAAGACAAGTGCATCTCTAAAATTCACTGTGTTGAACCCAAAGGGCCGAATTTGGACAATGGTTGCTGGGGGAGGTGCTAGTGTCATCTACGCTGACACAGTAGGAGATCTTGGCTTTGCAAATGAGCTTGGAAACTATGCAGAATATAGTGGTGCACCCAATGAAGAGGAGGTTTTGCAGTACGCCAGAGTTGTAATTgatTGTGCAACTGCAGATCCAGATGGCCAAAAAAGGGCTCTTGTTATTGGAGGAGGCATAGCTAACTTTACCGATGTTGCTGCTACTTTTAGTGGCATAATCCGGGCACTAAAGGAGAAGGAATCAAAGTTAAAGGCAGCAAGAATGCACATTTACGTGAGGAGAGGCGGTCCGAACTACCAAAAGGGTCTAGAGAAAATGCGAGCACTTGGAGACGAAATTGGCATCCCGATTGAGGTTTATGGACCTGAAGCAACAATGACTGGTATATGCAAAGAGGCAATACAATGCATTACTGCTTCCGCTTAA 1272 0.4292 MARKKIREYDSKRLLKEHFKRLSGKDLPIKSAQVTEATDFTELQDKEPWLSSSKLVVKPDMLFGKRGKSGLVALNLDLAQVASFVKERLGKEVEMGGCKGPITTFIVEPFIPHNEEFYLNIVSDRLGNSISFSECGGIDIEENWDKVKTVFVPTGVSLTSEIVAPLVATLPLEIKGEIEEFLKVIFTLFQDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVMSATESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGFANELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGQKRALVIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIYVRRGGPNYQKGLEKMRALGDEIGIPIEVYGPEATMTGICKEAIQCITASA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01450 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Tsu05g01450 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Tsu05g01450 423 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Tsu05g01450 423 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 1-RELATED 1 423 - -
Tsu05g01450 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Tsu05g01450 423 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Tsu05g01450 423 Gene3D - 1 233 - -
Tsu05g01450 423 Gene3D - 240 422 IPR016102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01450 Tsu-Chr5 13798789 13803223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01450 1 423 Acyl Lipid Metabolism Gene Families AT1G10670 88.889 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01450 K01648 - gmx:100818180 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01450 05 13798789 13803223 Tsu05g01450 05 13798789 13803223 ECH