Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01443 ATGTCGACGGTGTTTCCTTCCTCCACATTCCGACCAACCTCCATCCGTTGCTCCAACGACCGCCAGGCGCTTTTTAACCGCATCGCCCCTGTCTATGATAACttgaatgatttGCTGAGCTTGGGTCAGCACCGAATTTGGAAGCGAATGGCAGTTTCGTGGACTCAAGCAAAAATGGGTGATCGCGTGTTAGATGTGTGCTGTGGAAGTGGTGATTTAGCATTTCTCTTGTCCAACAAAGTTGCCTCCAATGGCAAGGTGATTGGTCTTGATTTCTCAAAGGAACAGTTAATGGTCGCCTCATCACGGTCGTTTACaaagaattgcttcaagaaTATTGAGTGGGTTGAAGGTGATGCTCTTGACTTACCATTTGCTGATAATTACTTTGATGCAATCACTATGGGCTATGGTCTTCGAAATGTTGTTGATAAGCGTAAAGCCATGCAGGAAATTTTACGAGTGCTTAAACCTGGTTCCAATGTGTCGATCCTTGACTTCAATAAAAGCAATGAGCTACTAACTTCTTCAATTACGGAGTGGATGATTGACAATATTGTTGTCCCTGTTGCCTCTGTTTATGGCCTTTCAGATGACTACAGATATCTCAAGAGGTCAATAAGAGAATTTTTAAcagGGAAGGAATTGGAGAAACTTGCTTTAGACGTAGGATTTTCTACGGCCAGACATTATGAGATTGGTGGAGGCCTCATGGGGTGCTTGGTAGCTAAAAATTAG 738 0.4214 MSTVFPSSTFRPTSIRCSNDRQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWTQAKMGDRVLDVCCGSGDLAFLLSNKVASNGKVIGLDFSKEQLMVASSRSFTKNCFKNIEWVEGDALDLPFADNYFDAITMGYGLRNVVDKRKAMQEILRVLKPGSNVSILDFNKSNELLTSSITEWMIDNIVVPVASVYGLSDDYRYLKRSIREFLTGKELEKLALDVGFSTARHYEIGGGLMGCLVAKN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01443 245 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 23 244 IPR004033 GO:0008168
Tsu05g01443 245 PANTHER METHYLTRANSFERASE 7 244 - -
Tsu05g01443 245 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 245 IPR004033 GO:0008168
Tsu05g01443 245 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 10 245 IPR004033 GO:0008168
Tsu05g01443 245 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 32 47 IPR023576 GO:0008168
Tsu05g01443 245 Gene3D Vaccinia Virus protein VP39 27 245 IPR029063 -
Tsu05g01443 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 236 IPR029063 -
Tsu05g01443 245 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 20 245 IPR032904 GO:0042372|GO:0052624
Tsu05g01443 245 Pfam ubiE/COQ5 methyltransferase family 22 239 IPR004033 GO:0008168
Tsu05g01443 245 CDD AdoMet_MTases 62 159 - -
Tsu05g01443 245 PANTHER 2-PHYTYL-1,4-BETA-NAPHTHOQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 7 244 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01443 58 182 Acyl Lipid Metabolism Gene Families AT3G18000 28.800 2.20e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01443 K23095 - gmx:100789470 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01443 05 13656245 13660403 Tsu05g01443 05 13656245 13660403 ECH