Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01440 ATGTGTTTCTCTTCTTGGCACAATCAAAATCTAGGaacaaacaattttgtttttgtgaatggaagaagaagaagaagacaagaTCAATGTAAACAAATTCAAACGGATTCTTCAATAGAAACAAACAAGAGAAAATTCTCAACTATGGATTTTAGCTTTTGTTTGACTTCTCCAATCATTTACAATCTTGTacattttcttcttgttttttcttttctttgtcctgttttttcttcctcaaaaatTGATAACAACCCTGTTGTTAATAACACTTTTAAACCAATTGATGAGTTGCATAAATTGAATATCATAAGAGATCGTCTTCAACAGATTAATAAACCTTCTACAAAGACAATTCAGagTCCTGATGGTGATATCATAGAATGTGTTGTATCTCATAATCAACCGGCTTTTGATCATCCTCTATTAAAAGGACAAAAACCACTGGATCCTCCGGAAAGGCCTAAATTTCATAACAAAATGGATGTCTCGAGTGAAAATTTTCAGTTATGGAGTTTGTCCGGAGAATCATGTCCAGAAGGAACAATTCCAATTAGAAGAACAACGGAACAAGACATGTTACGAGCTAGTTCGATGAAAACATTtggaagaaaattaaaaaaacgtGTTAGAAGGGACACAAATAGCAATGGACATGAGCATGCAGTTGGGTATGTGACTGGAAATCAATATTATGGAGCAAAAGCTAGCATAAACGTGTGGGCCCCACGAGTAGCAAATCAATATGAATTCAGCTTGTCCCAAATGTGGGTCATTTCTGGTTCATTTGGAGATGATCTCAACACCATTGAAGCTGGTTGGCAGgtCAGCCCTGAGCTCTATGGGGACAGTTACCCTAGATTCTTTACTTATTGGACAAGTGATGCATATCAAGCAACTGGATGCTACAATTTACTCTGTTCAGGCTTTGTTCAAACTAACAATAAAATTGCAATTGGGGCTGCAATCTCTCCAACTTCTTCATATACTGGGGGACAATTTGATATTAGTTTGCTAATTTGGaagGATCCGAAGCACGGAAACTGGTGGCTGGAGTTCGGATCCGGGATCTTAGTCGGATACTGGCCATCTTTTTTGTTCACGCATTTAAGGGATCATGCAAGTATGGTACAATTTGGTGGTGAAATTGTGAATTCAAGACAAGGGTCACATACTTCAACTCAAATGGGTAGCGGACATTTTGCTGGAGAAGGTTTTGGAAAAGCATCATATTTTAGGAATTTGCAAGTTGTGGATTGGGATAATAATTTGATACCCTTGTCAAATCTTAGGGTTCTAGCTGATCATCCAAATTGCTATGACATACAAGGAggaattaataatgtttgggggaattatttttattatggtGGACCAGGAAGAAATGTGAAATGTCCCTAA 1401 0.3369 MCFSSWHNQNLGTNNFVFVNGRRRRRQDQCKQIQTDSSIETNKRKFSTMDFSFCLTSPIIYNLVHFLLVFSFLCPVFSSSKIDNNPVVNNTFKPIDELHKLNIIRDRLQQINKPSTKTIQSPDGDIIECVVSHNQPAFDHPLLKGQKPLDPPERPKFHNKMDVSSENFQLWSLSGESCPEGTIPIRRTTEQDMLRASSMKTFGRKLKKRVRRDTNSNGHEHAVGYVTGNQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSYTGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEIVNSRQGSHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNNLIPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVKCP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01440 466 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 51 466 - -
Tsu05g01440 466 Gene3D - 241 355 - -
Tsu05g01440 466 PANTHER - 51 466 - -
Tsu05g01440 466 Pfam Neprosin 249 459 IPR004314 -
Tsu05g01440 466 Pfam Neprosin activation peptide 118 225 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01440 Tsu-Chr5 13620492 13625251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01440 - - gmx:100776639 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01440 05 13620492 13625251 Tsu05g01440 05 13620492 13625251 ECH