Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01355 ATGACTATGGAGCTTGGCTTCCTTTGCAGAGGAACAACAACActtgttgttgtttttctttccttgttcatttgtttcattcATGTCTCTTCATCTTCTATGTACTCGGAATTGAATCCTATAAAACCTAGACACTCACGACTTCTCAGGAGCGCTGTGCAGCGTGAAACTCCAACATCACAGCTTTCTGAAATATGGACACCTCTGGAAAACCAAGGTTGGAAACCTTGCGATGAATCAATAATAAAGCCAACATTACCCGAGAAGTCTGAAGGATACATCCAGGTTTTTCTTGATGGAGGTCTGAACCAGCAAAGGATGGGGatatgtGATGCAGTTGCTGTTGCAAAGATACTGAATGCAACTCTTGTGATCCCATACCTGGAATTAAATCCTGTGTGGAAGGATTCAAGCTCATTCGAGGATATATTTGATGTCGATCATTTCATTGATGTATTGAAGGATGATGTTTCTATAGTTAAAGAGCTTCCTGAAGAGTACTCGTGGAGTTCAAGGGAGTACTATGCGTTGGCTATTCGAGATACCAGAATCAAGGCTGCACCTGTACATGCAACAGCCAACTGGTATATTGAGAATGTTTTGCCTGTCCTACAAAGTTATGGTATTGCTGCAATATCTCCATTTTCTCACCGCCTGAGTTTTGACAACTTGCCTATGGATATCCAACACCTGCGCTGTAAAGTCAACTTTCAAGCTTTAGTCTTTGTTCCCCATATCAGAGCACTCGGAGATGCCCTTGTCAGCCGCCTTCGCAATCCTCAACGTTCTACTGAAGAAATGGGCTCCAACTACCTTCAAGAGGTCACAGATGCAGATGATAATAAAAATGCAGGGAAATTTGTTGTTCTGCACCTCCGATTTGATAAGGATATGGCAGCCCATTCAGCATGTGATTTTGGCGGCGGGAAAGCTGAAAAATTGGCCCTTGCCAAGTATAGACAGGTGATTTGGCAGGGAAGGGTTCTTAATTCCCAATTCACCGATGAAGAGTTGAGGAGTCAGGGCCGTTGCCCCATGACTCCCGAGGAGGTTGGGTTGTTGCTAGCAGCTTTAGGATTTGACAACAGCACTCGTTTATATCTTGCTTCTCATAAGGTCTATGGTGGAGGAGCCAGGATTTCTACTTTGAAACAATTGTTTCCTCTGATGGAAGACAAAAAGAGCCTTACTTCGCCTTTTGAGCGTACTCTGATAAAGGGAAAAGCTTCTCTATTAGCCGCACTTGACTACTACATTAGTATGCATAGTGACATCTTCATTTCTGCTTCCCCAGGAAATATGCACAATGCATTGGTGAGTTCTCCCCTAACTACACCTTAA 1341 0.4228 MTMELGFLCRGTTTLVVVFLSLFICFIHVSSSSMYSELNPIKPRHSRLLRSAVQRETPTSQLSEIWTPLENQGWKPCDESIIKPTLPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWKDSSSFEDIFDVDHFIDVLKDDVSIVKELPEEYSWSSREYYALAIRDTRIKAAPVHATANWYIENVLPVLQSYGIAAISPFSHRLSFDNLPMDIQHLRCKVNFQALVFVPHIRALGDALVSRLRNPQRSTEEMGSNYLQEVTDADDNKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGGARISTLKQLFPLMEDKKSLTSPFERTLIKGKASLLAALDYYISMHSDIFISASPGNMHNALVSSPLTTP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01355 446 Pfam GDP-fucose protein O-fucosyltransferase 93 437 IPR019378 -
Tsu05g01355 446 PIRSF UCP009360 6 442 IPR024709 -
Tsu05g01355 446 CDD O-FucT_plant 93 439 IPR024709 -
Tsu05g01355 446 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 15 440 - -
Tsu05g01355 446 PANTHER O-FUCOSYLTRANSFERASE 39 15 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01355 Tsu-Chr5 12415871 12420903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01355 62 438 Miscellaneous Gene Families AT1G22460 33.509 2.49e-73 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01355 - - lja:Lj2g3v1454940.1 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01355 05 12415871 12420903 Tsu05g01355 05 12415871 12420903 ECH