Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01257 ATGGCTGACGTGGAAGTTAGAGCAGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACTATTGATAAAGTTGTTTTCACATCTTCAGCAACTGCTGTAGTTTGGAGGGAGGATCGTAAAACCATTGAACCTGAAATTGATGAAATTCATTGGAGTGATGTCAATTTCTGTCGCAAATTCAAGCTATGGCATGGGATATCAAAGACATTATCAGAGAAAACAGCGTGGGCCTTAGCAATGGACAGAGGTGTGAATATGGTGTCAATAAACGCAGGACTATTGATGACTCATGATCTTACCATCAAACACCCTTACTTGAGAGGTGCTGCTGAAATGTATGAGGATGGTGTCTTTGTGACAGTTGATTTAGGATTCTTGGTGGATACCCACATTTGTGTCTACGAAGATGTTTCATCGTTCGGGCGTTATTTGTGCTTCAATCATACTATTAATACTCAACACGACGCCGTTCAACTTGCACAAAAATTAGCTCCTACCGCATCTTCTTCCTTACCCCAAAGTGATGACTATGGAAAGATTTTCATCGAACAGAAAATAAGCAACAAGAAGTTGAACAAATTGATGGTGGACTTTGAGGCTTAA 606 0.4059 MADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTIEPEIDEIHWSDVNFCRKFKLWHGISKTLSEKTAWALAMDRGVNMVSINAGLLMTHDLTIKHPYLRGAAEMYEDGVFVTVDLGFLVDTHICVYEDVSSFGRYLCFNHTINTQHDAVQLAQKLAPTASSSLPQSDDYGKIFIEQKISNKKLNKLMVDFEA 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01257 201 Gene3D - 1 201 - -
Tsu05g01257 201 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 167 IPR036291 -
Tsu05g01257 201 PANTHER CINNAMOYL-COA REDUCTASE 1-LIKE 2 200 - -
Tsu05g01257 201 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01257 Tsu-Chr5 11326859 11330756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01257 1 166 Miscellaneous Gene Families AT1G09510 32.000 3.81e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01257 - - gmx:100793329 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01257 05 11326859 11330756 Tsu05g01257 05 11326859 11330756 ECH