Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01254 ATGGAAAAACACGGCGACACCAATGACGCAACAATAATCAAACCTATTCCTTTGCCTTCTAAATTTCCGTTAAGCTTTTTCGAAGCAACAGTTGCTTCTACGGTGGCTTTAGGATTTATCATTGGTCTTCTTGGTGTTTATCTTACCATGCCAGATTCTGATTATAGTTTCCTTAAACTACCTCGTACACTTCATGATCTTCAACTTCTAAGAGATAACCTTGAGAGCTATACAAGTGACTACACTGCACAAGTCTTGGTGGGATACTGTTTGGTTTATATATTCATGCAGACTTTCATGATTCCAGGGACTGTGTTTATGTCATTACTTGCTGGAGCACTCTTCGGTGTCTTTAAAGGTGTGGCACTGGTTGTATTCACCGCCACAGCGGGAGCTTCTTCGTGTTTTTTCCTGTCAAAACTTATTGGTCGACcccttctcttctctctctggCCAGACAAGTTGAAGTTCTTCCAAACTCAGGTGGCTAAAAGAAGAAAGAGTTTGTTGAACTACATGCTTTTTCTGAGACTGACTCCGACTCTTCCTAACACGTTTATAAATTTCGCGTCACCAATTGTGGATGTTCCatatcatattttcttcctaGGAACTGTCATTGGACTCATACCTGCTGCTTATGTCACTGTCAGGGCTGGGTTAGCTCTTGGGGAGCTACAATCTGTGGGAGATCTCTATGATTTCAACTCAATCGCCACGTTATTTTTGATAGGCATTATATCGGTTACACCAACACTAATGGGCAAGAGCAATTCGTAA 780 0.3962 MEKHGDTNDATIIKPIPLPSKFPLSFFEATVASTVALGFIIGLLGVYLTMPDSDYSFLKLPRTLHDLQLLRDNLESYTSDYTAQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCFFLSKLIGRPLLFSLWPDKLKFFQTQVAKRRKSLLNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLGTVIGLIPAAYVTVRAGLALGELQSVGDLYDFNSIATLFLIGIISVTPTLMGKSNS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01254 259 PANTHER SNARE ASSOCIATED GOLGI PROTEIN-RELATED 6 258 - -
Tsu05g01254 259 Pfam SNARE associated Golgi protein 101 220 IPR032816 -
Tsu05g01254 259 PANTHER - 6 258 IPR045014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01254 Tsu-Chr5 11298332 11301361 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01254 - - mtr:MTR_5g029890 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01254 05 11298332 11301361 Tsu05g01254 05 11298332 11301361 ECH