Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01229 ATGGAACCAAATCCCGCAAAAGCATTGGATGGAGCTGCACTCAGTCTGAAGCGAAAGAGGGCCACCCAATGTGTTGCACATCTGACTGGAGCTTCGGCACCATCAAACTTGATTATCAAACAAATGAGATTGGTCGGTGATGAAGGCAAACCGGCTGACTCTGGTCCTGGTATTTCAAGGTCCTTGGTAAGGTATTATTTGAACTATAAGAAAAGTGGGATGCCCAAACGTTTGATGTTCTATAAAAACGGTGAATGGTTTGACTATCCTAAGGATGCTGTTGATTTGGTTAAGAAAAATTTCGAAATCAAGAAGGCAGCTGTGGAAGTAGAGTTAGGTGGCCATAATGTTGTGCTAGATTTTTTGCATATGTATAGCGTGGACTTGAAAACGGGTTTGCAACAACCCATTGCTTGGACTGATGAGTTGGGGTGCTGCTTTTTCCCTGAAGTGTTTGCTGGTTCTGATGAAGAACCCAATTATTTAGGCAAGCAGGAGGGTGGAGAAAGTCATGATGTCAAAGAGCCACatgaaataaaattacatttatcaATTGAAATAAATGGGGCGGATGAATCCAAGTTGGGGGAGTATAGTGGGGAGTCTAATGCTGTTGCTAAGGATGTAGAAGCTGACAGTCATGATAGCACGCACAAAATGGGCAGTAAAAATGTTGCAGCTATAGAGCAAGAACAAGACGTAGACTTAGATGCTTATACTGAATCTGCATATGGAAAACTGGATATAGATTCTGTACAGAAGATGTTTCTTACAGGAATGACTACTTTGGGCGTTACTAACGCTGACATAGTTGAGATTTACCGCAGCTCAGGTATTTCAATGCAAGCGCGACTGGAGTTATTTCAGAAGCAAGCTGAAATCACAAAAGGAGTTCAGGGGGATGCTAATGTTCGATATGCATGGCTTGCTTGTTCTAAAAAGGAACTGTCTACAATGATGGAGTATGGGCTTGGTCACAATGGACTATCTGCATCCAAATGCATATATGGCATTGGTGTTCATCTTGCAGCTGTTAGTCACCCTTATGCCTGTGCACCTTATTGTGATGTTGACGAAAGTGGGATTAAGCATTTGGTTCTTTGCCGTGTCATAATGGGGAACATGGAGATTCTTCGTCCTGGCAGTGGTCAGCTTCGTCCCAGTGGTTGCGAATATGATAATGGAGTAGATGATATTCAGCACCCAAAATACTATGTAGTTTGGAATATGAACATCAATACTCATATCTATCCAGAATTTGTTGTCAGCTTCAAGGCCGCTTTGGATGCTGAAGGAAATGTTTGTTCAAATGAGAGTAAGAAAAATGGTTCTGGGGATTCTACGGTGGACACTGGAAAAGCTGCCAGTGTGCCTGCTAACACCCGAAGAACTCCGAAATCCCCTTGGCTGCCTTTTCCCGTGCTCTTTGCTGCCATCAGAAACAGGGTTCCTCCCAATGTTATGTTTCTTATCAGACCCCATTATGCACAGTTGATGTCAAAGAAGATTTCCCGTGCTGATTTCGTGATGAAGCTGAGGTTAATTGTTGGAGATGATTTACTGAGATCTGCAATAACTGACCTTCAATTGAAGGGACCAGATGGTAAATCAGACGAATCAAACATTAAGCAAGAGTGA 1638 0.4237 MEPNPAKALDGAALSLKRKRATQCVAHLTGASAPSNLIIKQMRLVGDEGKPADSGPGISRSLVRYYLNYKKSGMPKRLMFYKNGEWFDYPKDAVDLVKKNFEIKKAAVEVELGGHNVVLDFLHMYSVDLKTGLQQPIAWTDELGCCFFPEVFAGSDEEPNYLGKQEGGESHDVKEPHEIKLHLSIEINGADESKLGEYSGESNAVAKDVEADSHDSTHKMGSKNVAAIEQEQDVDLDAYTESAYGKLDIDSVQKMFLTGMTTLGVTNADIVEIYRSSGISMQARLELFQKQAEITKGVQGDANVRYAWLACSKKELSTMMEYGLGHNGLSASKCIYGIGVHLAAVSHPYACAPYCDVDESGIKHLVLCRVIMGNMEILRPGSGQLRPSGCEYDNGVDDIQHPKYYVVWNMNINTHIYPEFVVSFKAALDAEGNVCSNESKKNGSGDSTVDTGKAASVPANTRRTPKSPWLPFPVLFAAIRNRVPPNVMFLIRPHYAQLMSKKISRADFVMKLRLIVGDDLLRSAITDLQLKGPDGKSDESNIKQE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01229 545 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 531 - -
Tsu05g01229 545 MobiDBLite consensus disorder prediction 436 462 - -
Tsu05g01229 545 Gene3D - 245 426 - -
Tsu05g01229 545 SUPERFAMILY ADP-ribosylation 251 426 - -
Tsu05g01229 545 ProSiteProfiles RST domain profile. 463 534 IPR022003 -
Tsu05g01229 545 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 531 IPR044964 -
Tsu05g01229 545 ProSiteProfiles WWE domain profile. 64 139 IPR004170 -
Tsu05g01229 545 ProSiteProfiles PARP catalytic domain profile. 227 445 IPR012317 GO:0003950
Tsu05g01229 545 Pfam RCD1-SRO-TAF4 (RST) plant domain 465 529 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01229 Tsu-Chr5 11082498 11085781 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01229 - - mtr:MTR_7g011550 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01229 05 11082498 11085781 Tsu05g01229 05 11082498 11085781 ECH