Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01219 ATGATGACCGATTCTTTCGTTCACTATGCGTCACACAATTATTACCGCCACATAAACAAGAAAACTATGTTCATCTCTTCTACACCgttttcttctccttcaaccGCATTTTTCTCTTCATCTCCTAAACCTCTTCTTCGTTCTTCTACTCTTTATCTTCGATCTTCAACTTcttctacttcttcttcttccgcTATTACTTCTACTTCTTATTCCAATCTTGCTTTCATTATTAAACCTAAAGATAATAAAACCGTTGTTTCTGCTAATATGATTTCTTCTGTTTCTTCTAGAACTTTCCTCAATGCTCAAAATGAACAAGaTGTTCTTTCTGGAATAAAGAAGGAAGTAGATGCGGGAGCTTTGCCTCCCAGTATTGCTGCCGGTATGGAAGAATTGTATCTTAACTATAAAAGTGCAGTTATTAAAAGTGGAGATCCCAAAGCAGATGAGGTTGTATTGTCAAATATGACTGCTTTATTAGATCGCATATTTTTGGATGTGAAGGAGCCGTTTGTCTTTGAAGCACACCACAAAGCCAAGAGAGAGCCTTTTGACTACTACATGTTTGGTCAAAATTATATCCGTCCCTTGGTTGATTTCAACAATTCTTACGTTGGCAACATGCCCCTTTTCATTCAAATGCAAGAACAACTTAAGCAGGGACACAATATTATCTTGATGTCAAACCACCAAACTGAAGCAGATCCGGCTGTTATTTCGTTGCTGCTTGAATTGCGACTTCCATATATTGCTGAAAACTTGATTTATGTAGCAGGAGATAGAGTTATAACTGATCCTCTATGCAAGCCCTTCAGTATTGGCAGGAACCTGATCTGTGTTTATTCGAAAAAGCACATGCTTGATGATCCAGCACTTATAGAGATGAAAAGAAAAGCAAATACACGAAGTCTGAAGGAAATGGCTACACTTTTAAGGAGTGGATCACAAATAATTTGGATTGCCCCAAGCGGCGGTAGGGATCGACCAGTTGCCAACTCTGGGGAATGGGAACCGGCGCCCTTTGATCCTTCTTCAGTGGATAATATGCGAAGACTTGCCGATCATTCAGGTCCCCCAGGTCATATCTATCCTTTGGCAATATTGTGCCATGACATAATGCCCCCTCCACTTAAGGTACAGGGTTCTTTCCTTCGAGAGTTGGCCCTGATATTTTTTCCTCTTATTATTATTGACACCACACCATGTAATTTCTCAGGTCGAAAAAGAAATTGGGGAGAAAAGAATCATATCCTATCATGGGACTGGTATATCAGTTGCTCCAGAAGTAAGCTTTTCCAACGCCACTGCTGCTTGTGA 1320 0.3864 MMTDSFVHYASHNYYRHINKKTMFISSTPFSSPSTAFFSSSPKPLLRSSTLYLRSSTSSTSSSSAITSTSYSNLAFIIKPKDNKTVVSANMISSVSSRTFLNAQNEQDVLSGIKKEVDAGALPPSIAAGMEELYLNYKSAVIKSGDPKADEVVLSNMTALLDRIFLDVKEPFVFEAHHKAKREPFDYYMFGQNYIRPLVDFNNSYVGNMPLFIQMQEQLKQGHNIILMSNHQTEADPAVISLLLELRLPYIAENLIYVAGDRVITDPLCKPFSIGRNLICVYSKKHMLDDPALIEMKRKANTRSLKEMATLLRSGSQIIWIAPSGGRDRPVANSGEWEPAPFDPSSVDNMRRLADHSGPPGHIYPLAILCHDIMPPPLKVQGSFLRELALIFFPLIIIDTTPCNFSGRKRNWGEKNHILSWDWYISCSRSKLFQRHCCL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01219 439 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 74 382 - -
Tsu05g01219 439 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 74 382 IPR016222 GO:0004366|GO:0006650
Tsu05g01219 439 PIRSF G3POAT 3 406 IPR016222 GO:0004366|GO:0006650
Tsu05g01219 439 SMART plsc_2 225 371 IPR002123 GO:0016746
Tsu05g01219 439 Pfam Glycerol-3-phosphate acyltransferase N-terminal 97 172 IPR023083 GO:0004366
Tsu05g01219 439 Gene3D - 171 409 - -
Tsu05g01219 439 Gene3D - 95 170 IPR038114 -
Tsu05g01219 439 Pfam Acyltransferase 213 368 IPR002123 GO:0016746
Tsu05g01219 439 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 97 396 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01219 97 406 Acyl Lipid Metabolism Gene Families AT1G32200 66.559 1.62e-155 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01219 K00630 - ag:CAA41769 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01219 05 10844832 10853336 Tsu05g01219 05 10844832 10853336 ECH