Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01171 ATGGCAGCTCTGCAATACCTTGAATCCCTTCGTAGTTCACATCCTGAACTTGGAGATTGGTACAATTCTCTTGCGGATCTGTACCAAAAGAAGCTATGGCATCAGCTCACTCTCAAGCTCGAACAGTTTGTCGCGCTTGCCGTTTTCCAGGCTGGTGATGCTCTGATACAATTATATAACAATTTCATCACAGATTTTGAGACCAAAATCAACCTTCTCAAGCTTGCTCATTTTGCTGTGATGGTTTCCCGACAGTATTCCGAGAAAGAAGCTGCCATCAGTTATCTTGAAGGGGTAATTGAGAAACTCCAAGCCACTAGAGAGCAGCGTATAGAAGAGCCTATCCTATACATTAAGATGCAAATCGCCTTATTTAAGCTTGAACAAGGTGACCAAAAGGAATGCAAGAATCTTCTCGAAAATGGAAAGAGTACTTTAGACAGCATGACAGATATTGATCCAACTGTCTATGCTAGCTATTATTGGGTATCTTCTCAATATCACAAATCCCGTCAGGAATTTGCCGAGTTCTACAAAAGTGCCCTTCTCTATTTGGCATACACAGCAGTGGACTCACTCTCTGATTCATTCAAGCTGGATTTGGCATTCGACTTGTCCCTTTCGGCCCTGCTGGGAGATAACATCTACAACTTTGGAGAGCTACTTGCCCACCCTATTATTAAGAGTCTCCTGGAAACAAAGGTAGAATGGCTCTACTATATTCTGCAGGCATTTAATTCTGGTGATTTGGTTAGATATCAAGAATTATGCCAGGTGCATAATGCTGCTTTAAGGGCTCAACCAGCACTAGTTCAAAATGAACAGAAGCTGTTGGAAAAGATTAACATTCTCTGTCTGATGGAAATTATATTCAGCCGACCTTCCGAAGATCGAACCATTCCCTTGAGTGTAATTTCTGAGCGCACAAAGCTTTCTATTGAGGATGTGGAACATCTCCTTATGAAGAGTTTATCTGTTCATCTGATTGAGGGTATAATTGATCAAGTTGACGGCACAGTACATGTTTCCTGGGTGCAACCAAGAGTTCTAGGTATTCAACAGATAAAATCGTTGCGGGATCGGTTGGACAGTTGGACAGGAAAAGTACACACTGCATTGTTGTCCATCGAGGCTGAAACGCCTGATTTAATTGGATCATga 1161 0.4195 MAALQYLESLRSSHPELGDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYNNFITDFETKINLLKLAHFAVMVSRQYSEKEAAISYLEGVIEKLQATREQRIEEPILYIKMQIALFKLEQGDQKECKNLLENGKSTLDSMTDIDPTVYASYYWVSSQYHKSRQEFAEFYKSALLYLAYTAVDSLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLETKVEWLYYILQAFNSGDLVRYQELCQVHNAALRAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVISERTKLSIEDVEHLLMKSLSVHLIEGIIDQVDGTVHVSWVQPRVLGIQQIKSLRDRLDSWTGKVHTALLSIEAETPDLIGS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01171 386 ProSiteProfiles PCI domain profile. 174 347 IPR000717 -
Tsu05g01171 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 385 IPR035298 -
Tsu05g01171 386 SMART PINT_4 272 365 IPR000717 -
Tsu05g01171 386 PANTHER PROTEASOME COMPONENT (PCI) DOMAIN PROTEIN-RELATED 1 385 - -
Tsu05g01171 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 365 - -
Tsu05g01171 386 Pfam PCI domain 238 343 IPR000717 -
Tsu05g01171 386 SUPERFAMILY "Winged helix" DNA-binding domain 275 348 IPR036390 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01171 K03039 - gmx:100804455 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01171 05 10336841 10341953 Tsu05g01171 05 10336841 10341953 ECH