Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01152 atGGCTACTCTTGAAGACCTTGGTGTATCAGCTGCTATCAACATACTATCAGCTTTTGCTTTCTTGTTAGCATTTGCTTTACTAAGAATTCAACCAATCAATGACAGAGTTTATTTCCCAAAATGGTATATTAGTGGTGGAAGAAGCAATCCAAGAAGTTCTGGAAATTTTGTTGGGAAATTTGTCAACCTTAATTTTAAGACTTATTTGACTTTTCTTAATTGGATGCCTCAAGCTTTGAGAATGAGTGAAACTGAGATTATTAATCATGCTGGTCTTGATTCTGCTGTTTTTCTCAGAATTTATACTCTTGGCTTAAAGATGTTTATTCCAATGTCAATTGTGGCACTCCTCATTCTTATTCCAGTCAATGTATCAAGTGGAACATTGTTTTTCCTAAGAAAAGAATTGGTAGTGAGTGATATTGATAAACTCTCAATATCAAACGTTCCACCTAAATCTCTAAGatttttttttcacataggATTGGAATACATGTTCACAATATGGATTTGTTTTCTGCTCTACAAGGAGTATGATAATATAGCGTTAATGAGGCTACATTTCTTGGCCTCACAACGCAGGCGTGTGGAGCAATTTACGGTAGTAGTCAGGAATGTCCCTCATATTTCTGGTCACTCAGTATCGGATTCTGTGGACGGCTTCTTTCAAACAAACCACCCAGATCATTATATTGGACACCAGGCTGTATACAATGCAAACAGATTTGCTAAATTTGTGAGAAAAAGAGATAGATTCCAAAATTGGTTGGACTATTACCGCCTAAAGTTTCAGAGGAATCCAGATACGAGGCCAACGATGAAGACCGGATGTTTAGGGCTTTGGGGTAGGAAAGTTGATGCTATTGAGTACTATGATCATCATATTAAAGAACTTGATAAACTGATGGTATTGGAGCGCCAAAAGATTATAAAAGATCCCAAATCTATTTTGCCAGTGGCTTTTCTTTCATTCAATTCGCGTTGGGGAGCATCAGTATGTGCACAAACCCAACAAAGCAAAAATCCTACACTCTGGTTGACTGATTGGGCTCCAGAGCCACGTGACATATATTGGCGAAACTTGGCCATACCATTTGTTTCTTTAACCATCCGaaaacttataataacattATCAGTGTTTGCCTTGGTATTCTTCTACATGATTCCCATTGCTTTTGTGCAATCCCTTGCGAATTTGGATGGTCTTGAAAGAGTTGCTCCTTTCCTCAGACCAGTAATAGAATTGAAATTCATCAAGTCCTTTCTACAAGGTTTTCTTCCTGGTTTGGccctcaaaatatttttatatattctacCTACAGTTCTCATGATTATGTCGAAGATTGAAGGATATATTGCATTATCGACACTGGAACGGAAGACATCagcaaaatattattactttATGCTTGTGAATGTTTTCTTGGGAAGCATAATAACTGGAACTGCATTTGAACAACTGCATGCTTTTCTTCACCAGTCACCTACACAGATTCCTAGAACAATTGGAGTTTCCATTCCAATGAAGGCTACCTTCTTTATGACGTACATAATGGTTGATGGCTGGGCTGGAATTGCCGGTGAAATTCTCAGATTAAAGCCGTTGGTTATATATCATCTCAAGAATGTGTTCATAGTTAAAACCGAGAGAGATCGAGGAAAGGCCATGGATCCTGGGAGTGTGGACTATCCCGAAACTCTGCCAAGCCTTCAATTATATTTCCTTCTTGGCATTGTGTATGCTGTGGTGACTCCAATCCTTCTTCCTTTCATACTAGTCTTCTTCGCCTTCGCATATTTGGTTTATCGTCATCAGATAATCAATGTGTACAATCAACAGTATGAAAGTGCTGCTGCATTTTGGCCGCAAGTTCACAGCCGCATTATCGCAAGCTTAATAATATCACAGCTGCTTCTGTTAGGCTTGCTTAGCACAAAAAAGGCAGCTAGATCTACACCTTTGCTTGTGTTGTTACCAATATTGACATTTGCATTTCACAAGTATTGCAAGAATCGTTTCGAGCCAGCATTTAGGAAGTACCCTGTCGAGGAAGCAATGTCCAAGGATATATTGGAGAAAACAACAGAACCTGACCTAAACATAAAAGCATATTTAGCAGATTCTTATTTGCATCCAATCTTAAGATCatttgaagttgaagaagagGAATTAGTTGAACTTGAAACGGTTGAAGTGAGAGTAGATAAACTCCAAACTCATCAAGTTGCTAGTCAAACAAGGAGTGAATCAAGTTCTCCTTCACCACCACATgatgttcatcatcatcaaccttcaCCACCGCATCATCATGTTCATCAACATCAACCTTCACCACCTCATTACAATGATTACCCTTTACCACCTGAGTATTATTACCATCATACATCCCCTCCACATTATAACTATCAATATCAAGATCAACCTTGA 2430 0.37 MATLEDLGVSAAINILSAFAFLLAFALLRIQPINDRVYFPKWYISGGRSNPRSSGNFVGKFVNLNFKTYLTFLNWMPQALRMSETEIINHAGLDSAVFLRIYTLGLKMFIPMSIVALLILIPVNVSSGTLFFLRKELVVSDIDKLSISNVPPKSLRFFFHIGLEYMFTIWICFLLYKEYDNIALMRLHFLASQRRRVEQFTVVVRNVPHISGHSVSDSVDGFFQTNHPDHYIGHQAVYNANRFAKFVRKRDRFQNWLDYYRLKFQRNPDTRPTMKTGCLGLWGRKVDAIEYYDHHIKELDKLMVLERQKIIKDPKSILPVAFLSFNSRWGASVCAQTQQSKNPTLWLTDWAPEPRDIYWRNLAIPFVSLTIRKLIITLSVFALVFFYMIPIAFVQSLANLDGLERVAPFLRPVIELKFIKSFLQGFLPGLALKIFLYILPTVLMIMSKIEGYIALSTLERKTSAKYYYFMLVNVFLGSIITGTAFEQLHAFLHQSPTQIPRTIGVSIPMKATFFMTYIMVDGWAGIAGEILRLKPLVIYHLKNVFIVKTERDRGKAMDPGSVDYPETLPSLQLYFLLGIVYAVVTPILLPFILVFFAFAYLVYRHQIINVYNQQYESAAAFWPQVHSRIIASLIISQLLLLGLLSTKKAARSTPLLVLLPILTFAFHKYCKNRFEPAFRKYPVEEAMSKDILEKTTEPDLNIKAYLADSYLHPILRSFEVEEEELVELETVEVRVDKLQTHQVASQTRSESSSPSPPHDVHHHQPSPPHHHVHQHQPSPPHYNDYPLPPEYYYHHTSPPHYNYQYQDQP 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01152 809 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 752 IPR045122 GO:0005227
Tsu05g01152 809 Pfam Late exocytosis, associated with Golgi transport 7 178 IPR032880 -
Tsu05g01152 809 Pfam Cytosolic domain of 10TM putative phosphate transporter 199 361 IPR027815 -
Tsu05g01152 809 Pfam Calcium-dependent channel, 7TM region, putative phosphate 372 644 IPR003864 GO:0016020
Tsu05g01152 809 MobiDBLite consensus disorder prediction 741 809 - -
Tsu05g01152 809 PANTHER TO DEHYDRATION PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01152 Tsu-Chr5 10103896 10109611 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01152 K21989 - gmx:100820282 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01152 05 10103896 10109611 Tsu05g01152 05 10103896 10109611 ECH