Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01140 ATGTCTCAAGAAATTTGCATACTACCATTTTTTGGACAAGGCCATCTTCTACCATGTTTCCAACTATGCAACCATTTAACTTCTTCCACAAACTTCAACGTCACCCTTCTCATCTCCTCCACTCTCTCCACCTCCGTTCCCTCTTCTCTCCTTCAAAATCATCTCTTTCAACTCATCTTAATCCCATCACCACCTCCTTCGCCGGAACACAGCCACGATGAGCTTGCTAAAGGGCTCCTAAATGTCTTGTCTGACTACCATCGTTCGACAAGACCCGTTTGTGCAATTGTCGATGTTATGATGAGCTGGTCAAATGACATTTTTAAGAAACTTGAAATTCCTACGGTGGCGTTTTTCACTTCCGGTGCATGCTCTGCCGTCATGGAGCTTGTAGAATGGAAAGCTCGTCCGTTAGAATTGAGACCCGGTGAGATCCGTTTTGTTCCCGGATTACCTGATGACATGGTGCTTACATACTCAGATGTGAAACGACGACGTCACGAGCCTCCTCCTCCGCCACCACATCACGGCTTTACTCCGCCTCCAGGTGGATTTGGACCAGGAAAGATGGGCCCACCTAAACATGGAGATCAGCCACCGTGGCTAAATGAGGTAAGAGATACAATTGCGTTGATGATCAACACGTGTGATGATCTGGAGCAACCATTTATTGATTACATCGCAAACCATGTTGGAAAACCGGTGTGGGGTGTTGGGCCGCTTTTGCCTGAGCAGTATTGGAAATCTTTTGATTCAGTTATCCATGACCGTGATTTTCGCTCAAACCGGTTGTCAAGTATCACCGAGGAAGAAGTGGTTCAGTGGTTAGATTCCAAACCAAATGGATCGGTTTTATACATATCTTTTGGTACTGAAGTGGGTCCCACAATAGATGAGTATACAGAACTAGCTCAAGCAATTGAGTCATGTAAGCAACCATTTATATGGGTGGTTCAACCCGGACCTGGTAGACCCGATCCACCTCATTTAGGAGGTGAACCTGGTTCCGGAAAACCAGAAGCAAAAGAAGGGTATTTTCCTCATGGATTGGATAAAAATGTTGGGAATAGAGGTTTGATAATAAGTGGATGGGCACCACAACTATTGATATTGAGTCACAAATCAATGGGGGCATTCTTATCTCATTGTGGTTGGAATTCGACTATGGAGGCGATTGGACGTGGGGTTCCATTGTTGGCCTGGCCTATAAGGGGTGACCAACACCATAATGCAAAATTGGTGGTGAGTCATCTTAGGGTGGGTTATATGGTCTCTGATGATCTATCAAAAAGGGTAACCAAGGATGATATAGTTGTGGGAATACAGAGGTTGATGAGTGATGAAGAAATTAAGACGAATGCTGTGGTTCTTAGTGCTAAGTTTCATAATGGTTTTCCAAGAAGTTCCGTAGCTGCTTTAGATGCTTTTAAGGATTGTATCAATAAGATATTTGTTTAG 1458 0.4417 MSQEICILPFFGQGHLLPCFQLCNHLTSSTNFNVTLLISSTLSTSVPSSLLQNHLFQLILIPSPPPSPEHSHDELAKGLLNVLSDYHRSTRPVCAIVDVMMSWSNDIFKKLEIPTVAFFTSGACSAVMELVEWKARPLELRPGEIRFVPGLPDDMVLTYSDVKRRRHEPPPPPPHHGFTPPPGGFGPGKMGPPKHGDQPPWLNEVRDTIALMINTCDDLEQPFIDYIANHVGKPVWGVGPLLPEQYWKSFDSVIHDRDFRSNRLSSITEEEVVQWLDSKPNGSVLYISFGTEVGPTIDEYTELAQAIESCKQPFIWVVQPGPGRPDPPHLGGEPGSGKPEAKEGYFPHGLDKNVGNRGLIISGWAPQLLILSHKSMGAFLSHCGWNSTMEAIGRGVPLLAWPIRGDQHHNAKLVVSHLRVGYMVSDDLSKRVTKDDIVVGIQRLMSDEEIKTNAVVLSAKFHNGFPRSSVAALDAFKDCINKIFV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01140 485 CDD GT1_Gtf-like 5 476 IPR002213 GO:0008194
Tsu05g01140 485 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 273 462 IPR002213 GO:0008194
Tsu05g01140 485 ProSitePatterns UDP-glycosyltransferases signature. 364 407 IPR035595 -
Tsu05g01140 485 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 480 - -
Tsu05g01140 485 PANTHER GLYCOSYLTRANSFERASE 3 480 - -
Tsu05g01140 485 MobiDBLite consensus disorder prediction 164 201 - -
Tsu05g01140 485 Gene3D Glycogen Phosphorylase B; 1 254 - -
Tsu05g01140 485 MobiDBLite consensus disorder prediction 321 346 - -
Tsu05g01140 485 Gene3D Glycogen Phosphorylase B; 255 461 - -
Tsu05g01140 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 476 - -
Tsu05g01140 485 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01140 Tsu-Chr5 9995560 9997344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01140 5 449 Glycosyltransferase AT2G15480 26.423 3.37e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01140 - - jre:108980936 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01140 05 9995560 9997344 Tsu05g01140 05 9995560 9997344 ECH