Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01126 ATGAAGCATAAAGATGGAAAACCGATCAACCAGCCGAACAAGAACCGATCTCTAACTGCGGCGATCACTATCATTGTTCTTTGTGGTTTATCATTCTATCTAGGCGGAGTCTTTAAATCTGGAAATGGCGGTGTTGATGTCATCAACACCATTCAGAAAACACTTGATTCTCCTAAGCAAACCTCAGGTTCTTTGCAGATTAGACCCTTTAATTTCCCTGAATGCAGCAGTGATTATCAAGACTATACTCCATGCACAGATCCAAAGAGATGGAGAAAGTATGGTACTTATAGACTTACTTTATTGGAACGCCATTGCCCTCCGATTTCCGAGAGGAAAGAATGCTTAGTTCCTCCTCCACCTGGTTACAAGCCTCCAATCAGATGGCCAAAGAGTAGAGATGAATGTTGGTACAGGAATGTGCCATATGATTGGATTAACAAGCAAAAGTCTAATCAGCATTGGTTGAGAAAGGAAGGAGAGAAATTTTTGTTTCCTGGTGGAGGTACTATGTTCCCTAATGGTGTCGGCGAATATGTTGATTTAATGCAAGATCTGATCCCAGGAATTAAAGATGGGACAGTTAGAACTGCAATTGATACTGGTTGCGGGGTTGCTAGTTGGGGTGGTGACTTGTTGGATCGCGGCGTTCTAACAATCTCTCTTGCACCGAGAGATAACCATGAAGCTCAAGTTCAATTTGCTTTGGAGCGCGGTATCCCGGCTATTCTTGGTGTCATCTCTACACAAAGACTTCCTTTCCCATCAAACTCATTTGACATGGCTCATTGCTCTAGATGCCTTATCCCATGGACAGAATTTGGTGGAATTTATCTCCAAGAAATTCATAGAATTCTTCGTCCTGGAGGTTTTTGGGTTTTATCCGGTCCACCAGTGAACTACGAGCGAAGGTGGCGTGGATGGAACACAACAGTGGAAGAGCAAAAATCAGATTATGATAAGCTACAAGATTTGCTGACATCAATGTGCTTCAAATTGTTCAACAAAAAAGATGACATTTATGTATGGCAAAAGGCCAAAGATAACGCTTGCTATGATAAGCTTCCTAGAGAGACCTATCCTCCAAAATGTGACGACAGTCTTGAACCAGATTCAGGATGGTACACTCCACTTCGCGCTTGCTTTGTGGTTCCAAACGAAAAGTACAAGAAATCAGGCCTCACTTACATGCCGAAATGGCCTCAAAGGTTGAATGTTGCACCTGAAAGGATTTCGCTTGTTCAGGGTTCTAGTACTAGTAGTTTTAGCCATGATAACAGTAAGTGGAAAAAGCGAGTTCAGCATTATAAGAAGTTGTTGCCTGATCTTGGAACAGAAAAGGTCAGAAATGTGATGGATATGAATACAGCTTATGGAGGTTTTGCTGCTTCATTGATCAATGATCCTTTGTGGGTTATGAATGTTGTTTCATCTTACAGTCCTAATACACTCCCTGTAGTTTTCGATCGTGGCCTTATCGGTACCTTCCACGACTgGTGTGAAGCTTTTTCAACATATCCTAGAACCTATGACCTACTTCATGCCGATGGACTCTTCACTGCTGAAAGTCACAGATGTGATATGAAGTATGTGCTGTTGGAAATGGACCGAATTTTGAGACCAGGCGGCCACACTATAATTCGAGAGTCTAGCTATTTTGCAGACGCCATTGTAACCATTGCGAAGGGTATGAGATGGATATGTCACAAACAAAACACCGAGTATGGTGTTGAGAAAGAGAAGATAGTGGTATGCCAGAAAAAGCTATGGCAACCATCCAACTCAGGATCAAGATGA 1797 0.4224 MKHKDGKPINQPNKNRSLTAAITIIVLCGLSFYLGGVFKSGNGGVDVINTIQKTLDSPKQTSGSLQIRPFNFPECSSDYQDYTPCTDPKRWRKYGTYRLTLLERHCPPISERKECLVPPPPGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLRKEGEKFLFPGGGTMFPNGVGEYVDLMQDLIPGIKDGTVRTAIDTGCGVASWGGDLLDRGVLTISLAPRDNHEAQVQFALERGIPAILGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLQEIHRILRPGGFWVLSGPPVNYERRWRGWNTTVEEQKSDYDKLQDLLTSMCFKLFNKKDDIYVWQKAKDNACYDKLPRETYPPKCDDSLEPDSGWYTPLRACFVVPNEKYKKSGLTYMPKWPQRLNVAPERISLVQGSSTSSFSHDNSKWKKRVQHYKKLLPDLGTEKVRNVMDMNTAYGGFAASLINDPLWVMNVVSSYSPNTLPVVFDRGLIGTFHDWCEAFSTYPRTYDLLHADGLFTAESHRCDMKYVLLEMDRILRPGGHTIIRESSYFADAIVTIAKGMRWICHKQNTEYGVEKEKIVVCQKKLWQPSNSGSR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01126 598 Gene3D Vaccinia Virus protein VP39 170 350 IPR029063 -
Tsu05g01126 598 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 4 591 - -
Tsu05g01126 598 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 81 587 IPR004159 GO:0008168
Tsu05g01126 598 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 591 IPR004159 GO:0008168
Tsu05g01126 598 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 310 IPR029063 -
Tsu05g01126 598 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 430 552 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01126 Tsu-Chr5 9868631 9873715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01126 - - gmx:100810681 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01126 05 9868631 9873715 Tsu05g01126 05 9868631 9873715 ECH