Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01114 ATGGGGGAGTTCACCGGTAGCGGGAGTGAGTATGTGCCTGTAGGTGATTCGCCTTCCCCGAGAACAAATCACATGAGGAAAGTTTCAGTTTTACCGCTTGTGTTTCTTATCTTCTATGAGGTATCAGGAGGACCTTTTGGTGTTGAGGATACTGTGAAAGCAGCTGGTCCTTTGTTAGCCTTACTTGGATTTTTGGTTTTTCCGTTTATATGGAGTGTCCCCGAAGCTTTGATCACTGCCGAAATGGGTACCATGTTCCCTGAAAATAGTGGTTATGTTGTGTGGGTGTCGTCTGCTTTGGGTCCTTTTTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTTAGTGGCGTGATCGATAATGCTTTGTATCCAGTTCTGTTTCTTGATTATCTTAAGTCTGCAATTCCGGCTGTTGGTGGTGGTTTAACTAGAGTATTTGCAACATGGGGTTTGACTATAGTTCTTACTTATTTGAACTATAGGGGTTTAACTATTGTTGGACTTGTTGCTGTTTGTTTAGGGATTTTCTCGCTTCTCCCATTTGTTTTCATGGGGATGTTGTCGATTCCAGACATGAAACCTGCAAGATGGTTGGAGACTACTAATCTAAATGATGTTGATTggaatttatatttgaatactCTATTTTGGAATCTCAATTATTGGGATTCCATAAGCACTCTTGCTGGTGAAGTTGAGAATCCGAAGAAAAACCTTCCTAAAGGTTTGTTTTATGCTTTGATCTTGGTTGTTGTGGCGTACTTCTTTCCTCTTCTGATTGGTACGGGTGCTCTTCCGGTTCAGCGCGAATTGTGGACTGACGGGTACTTCTCTGATATTGCTATGATCATTGGAGGAGTGTGGTTGAGATGGTGGCTTCAGGCTGCAGCTGCAATGTCAAACATGGGAATGTTTGTTGCCGAAATGAGTAGCGACTCTTTTCAGCTTCTTGGAATGGCCGAGAGGGGAATGTTGCCGGAGTTTTTCACCAAGAGGTCACGTCACGGAACGCCTCTTATAGGGATTCTTTTTTCGGCCTCAGGTGTGATTTTACTTTCATGGCTTAGCTTTCAAGAAATTGTAGCTGCAGAGAATTTCTTGTACTGTATTGGGATGATTCTGGAGTTTATTGCGTTCATATTGTTGAAGATTAAACATCCCAATGCACCTCGGCCTTACAAAGTACCAGGGGGAACGGCCGGAGCAATTATTATGTGCATCCCTCCAACAATATTGATCTGTGTGGTATTGGCTTTCTCCTCCCTCAAAGTATTTCTTATAAGCCTCGTTGCTATGGCGTTTGGTCTTGTGATGCAGCCTTGTCTCAAATTTATGGAGAAAAAGAGATGGATGAAGTTCTCACATAGTCCCGAGCTACTTGATATTGTCAATGGAGAGGACACTGAATCTTTGGTACAATAA 1422 0.4255 MGEFTGSGSEYVPVGDSPSPRTNHMRKVSVLPLVFLIFYEVSGGPFGVEDTVKAAGPLLALLGFLVFPFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAIPAVGGGLTRVFATWGLTIVLTYLNYRGLTIVGLVAVCLGIFSLLPFVFMGMLSIPDMKPARWLETTNLNDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKNLPKGLFYALILVVVAYFFPLLIGTGALPVQRELWTDGYFSDIAMIIGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFTKRSRHGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCIGMILEFIAFILLKIKHPNAPRPYKVPGGTAGAIIMCIPPTILICVVLAFSSLKVFLISLVAMAFGLVMQPCLKFMEKKRWMKFSHSPELLDIVNGEDTESLVQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01114 473 PANTHER POLYAMINE TRANSPORTER PUT1 8 464 IPR044566 GO:0022857
Tsu05g01114 473 Gene3D Amino acid/polyamine transporter I 24 456 - -
Tsu05g01114 473 MobiDBLite consensus disorder prediction 1 20 - -
Tsu05g01114 473 PIRSF AA_transporter 11 473 - -
Tsu05g01114 473 Pfam Amino acid permease 38 421 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tsu05g01114 473 PANTHER POLYAMINE TRANSPORTER PUT1 8 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01114 Tsu-Chr5 9741437 9744160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01114 4 473 Organic Solute Cotransporters AT1G31830 72.034 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01114 - - gmx:100816567 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01114 05 9741437 9744160 Tsu05g01114 05 9741437 9744160 ECH